Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa11g1643 | ATGAATCCTCATCCTATTGAAGATCATATGGTGCTCATCTCTCAGCTATATTCCGGTGCTTACTCTCAAATAATTCCTCAACAAGGTTTCCATCTTTGGGAGACAAAGCCAAGACGACGTCGTAAGAAGAACAAAGGAGGAGAAAACGGAGGCGGGGGAGTTAAGAAGAGGAAGCTGAGTGCAGAGCAAGTGAATCTTCTAGAACAAAACTTCGGCAACGAACATAAATTGGAATCTGAACGGAAGGACCGTCTCGCATCGGAGCTGGGCTTGGATCCACGTCAAGTGGCCGTGTGGTTCCAAAACCGAAGGGCCCGTTGGAAGAACAAGAAGTTGGAGGAAGAGTACTCCAGCCTTAAGAAAGCCCACGAGTCCACCATTCTCGAGAAATGCCGTCTTGAATCCGAGGTGCTGAAGCTGAAGGAGCAGCTTTCAGAAGCAGAGAAAGAGATTCAACGGCTTCTGGAGCGAGGAGATAGGGCGTCGAGCAGTAACAGCCCCAGTTCATCACACTCAGTGGAAGCTGTGGACCCACCATTCCTGGGAGAGTTTGGAGTGGCGGCTTATGATGATGATGTGTTTTACATGCCACACACCCATTACATCAGTGGCATGGATATTGAATGGATATATATGTGA | 639 | 0.4836 | MNPHPIEDHMVLISQLYSGAYSQIIPQQGFHLWETKPRRRRKKNKGGENGGGGVKKRKLSAEQVNLLEQNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKAHESTILEKCRLESEVLKLKEQLSEAEKEIQRLLERGDRASSSNSPSSSHSVEAVDPPFLGEFGVAAYDDDVFYMPHTHYISGMDIEWIYM | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa11g1643 | 212 | ProSitePatterns | 'Homeobox' domain signature. | 85 | 108 | IPR017970 | GO:0000981|GO:0006355 | |
Bisa11g1643 | 212 | CDD | homeodomain | 57 | 111 | IPR001356 | GO:0003677 | |
Bisa11g1643 | 212 | Gene3D | - | 48 | 119 | - | - | |
Bisa11g1643 | 212 | PRINTS | Lambda-repressor HTH signature | 81 | 90 | IPR000047 | GO:0003677 | |
Bisa11g1643 | 212 | PRINTS | Lambda-repressor HTH signature | 90 | 106 | IPR000047 | GO:0003677 | |
Bisa11g1643 | 212 | SMART | HOX_1 | 53 | 114 | IPR001356 | GO:0003677 | |
Bisa11g1643 | 212 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 43 | 171 | IPR045224 | GO:0003700 | |
Bisa11g1643 | 212 | FunFam | homeobox-leucine zipper protein ATHB-40 | 49 | 118 | - | - | |
Bisa11g1643 | 212 | ProSiteProfiles | 'Homeobox' domain profile. | 50 | 110 | IPR001356 | GO:0003677 | |
Bisa11g1643 | 212 | MobiDBLite | consensus disorder prediction | 32 | 59 | - | - | |
Bisa11g1643 | 212 | Pfam | Homeodomain | 56 | 109 | IPR001356 | GO:0003677 | |
Bisa11g1643 | 212 | SUPERFAMILY | Homeodomain-like | 54 | 119 | IPR009057 | - | |
Bisa11g1643 | 212 | MobiDBLite | consensus disorder prediction | 158 | 173 | - | - | |
Bisa11g1643 | 212 | MobiDBLite | consensus disorder prediction | 155 | 174 | - | - | |
Bisa11g1643 | 212 | Coils | Coil | 102 | 164 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa11g1643 | Bisa-ChrBisa11 | 37633036 | 37634666 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa11g1643 | 1 | 206 | Homeobox Transcription Factor Family | AT2G18550 | 55.909 | 1.46e-72 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Bisa11g1643 | Homeodomain | 7.4e-17 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa11g1643 | 11 | 37633036 | 37634666 | Bisa01g1889 | 01 | 32917806 | 32919573 | CCT | |
Bisa11g1643 | 11 | 37633036 | 37634666 | Bisa11g1643 | 11 | 37633036 | 37634666 | ECH |