Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1620 ATGCGTCGCTTTCCCTTCATCCCTGTCTTCTCTATGATGCTATTTTGCACCTTCTCTTTGATTCAGGGACAACAACCTTATATTGGTCGGGCCACAACAGCATGCCCCAGAAAGGGAAACAACAAATCAATTCGTGGTTACACTTGCAATGGCGTATCTCGAAGCTGCCAGGCTTACCTCACCTTCAAATCTCAACCCATTTATAACTCCATTTCCACAATCTCTACTTTGCTGGGATCTGACCCTTCTCAGCTTTCTGAAATCAACTCAGTTTCTCAGAACGCCACCTTCACAACAGATCAAATGGTGCTTGTTCCAGTCAACTGCTCTTGTGCAGGTGATTATTATCAGACAAATACATCCTACACAGTCCATGGCACAGACACATATTTTATAATTGCTAACAACACTTTCGAGGGTCTCTCAACCTGTCAAGCTCTGGAGGATCAAAACGACATTTCTGGAGATCTAGCCTCTGGTACTAACCTTATGGTTCCTCTTAGATGTGCTTGTCCCACGAAGAATCAAACTGATAGAGGTGTAAAGTACCTATTGAGTTACTTAGTAGACTGGGGTAACTCTGTTTCGCGTATTAGTCGAAGATTTGGTGTGCTCACTAATGCTACTCTTGATGCTAATACCCTTACTTATGAAGAATCCACCATATATCCCTTTACCACACTACTGGTGCCTCTTCAAGAGAAACCCAACGTTTCTCAAATCTCCGTGTCTCCGTCACCCTCTCCTCCAGCCTCGTCTCCTTCTTCTCCCACCGGTGGAAGCTCAAAAAAGACATGGGTTTATGCAGTTGTTGGAGCTGTTGCAGGTATTGCCTTAATATCAATCATCGCCATCTTCTTTTTCCGCACACGCTTTCCCAAAAGCAAGAAGAAAGACGATTCTGCAATTGAGTCTAAGAGTTTCGAGGCAGTGGAGAAACCAGAAGGGAAAAAGGTCGAGGATGAGTCTGAAACGTTGTCGCAGATAATATCCGGCATAGCTCAGTCTTTCAAAGTGTACCGATTCAAGGAACTACAGCTTGCAACGGATAACTTCAGTCCAAGCTGCTGCATCGAAGGGTCTGTTTATCGGGGTGTTATTAATGGTGATTTGGCTGCGATCAAAAAGATGGATGGTGATGTATCAAAGGAGATAGAGATTCTGAACAAAGCCAACCATTCTAATGTGATACGCCTTTCTGGGGTTAGCTTCAACGAGGGACACTGGTATCTGGTTTATGAGTATGCCGCAAATGGAGCCTTGAGTGATTGGATCTACTTCAACAAGGCGGACGATGGAAAGTTTCTGACTTGGACGCAGAGAATACAGATTGCTCTTGATGTGGCCACGGGACTTGACTATCTCCATAGCTTCACTTCTCCTCCTCATATCCACAAGGATCTCAAGACTGGTAACATTCTTCTGGATAGTGATTTCAGGGCCAAGATTACAAACTTAGGCCTTGCTAGGTCTATGGAAGGAGAGAAAGATCAATTCTCCATGACGAGGCATATAGTTGGAACAAGAGGATACATGGCTCCTGAGTATTTAGAAAACGGAATCGTTTCTACAAAGCTAGATGTGTATGCATTTGGGGTTATGATGCTGGAAATGCTAACTGGAAAAGAGGTTGCTGCTATTTACACAGAAGATAAGAGGAATTTATCAGACGTTTTAGGTGTGATAATCGACGAGGAAATTGGAGAGGAGAAGCTGAAGGATTTCATGGATCCTTCCCTGAATGGGAATTATCCATTGGAACTTGCTGGGTTTGTGGTTAGAATGATTGATAATTGCATGAAGAAAGACCCAGCAAGTCGGCCTGCCATGAGTGAAATTGTGCCATCTCTGTCTGTGACCTTGAATTCTTCATTGGCATGGGAAAAATCGGTTAACGTCTCAGGATACCACAGCTTTAGCAGGAGCTCTTGA 1932 0.4389 MRRFPFIPVFSMMLFCTFSLIQGQQPYIGRATTACPRKGNNKSIRGYTCNGVSRSCQAYLTFKSQPIYNSISTISTLLGSDPSQLSEINSVSQNATFTTDQMVLVPVNCSCAGDYYQTNTSYTVHGTDTYFIIANNTFEGLSTCQALEDQNDISGDLASGTNLMVPLRCACPTKNQTDRGVKYLLSYLVDWGNSVSRISRRFGVLTNATLDANTLTYEESTIYPFTTLLVPLQEKPNVSQISVSPSPSPPASSPSSPTGGSSKKTWVYAVVGAVAGIALISIIAIFFFRTRFPKSKKKDDSAIESKSFEAVEKPEGKKVEDESETLSQIISGIAQSFKVYRFKELQLATDNFSPSCCIEGSVYRGVINGDLAAIKKMDGDVSKEIEILNKANHSNVIRLSGVSFNEGHWYLVYEYAANGALSDWIYFNKADDGKFLTWTQRIQIALDVATGLDYLHSFTSPPHIHKDLKTGNILLDSDFRAKITNLGLARSMEGEKDQFSMTRHIVGTRGYMAPEYLENGIVSTKLDVYAFGVMMLEMLTGKEVAAIYTEDKRNLSDVLGVIIDEEIGEEKLKDFMDPSLNGNYPLELAGFVVRMIDNCMKKDPASRPAMSEIVPSLSVTLNSSLAWEKSVNVSGYHSFSRSS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1620 643 SUPERFAMILY Protein kinase-like (PK-like) 334 617 IPR011009 -
Bisa11g1620 643 ProSiteProfiles Protein kinase domain profile. 297 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1620 643 ProSiteProfiles LysM domain profile. 185 230 IPR018392 -
Bisa11g1620 643 Pfam LysM domain 192 231 IPR018392 -
Bisa11g1620 643 SMART serkin_6 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1620 643 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 630 - -
Bisa11g1620 643 FunFam PTI1-like tyrosine-protein kinase 3 416 631 - -
Bisa11g1620 643 Gene3D Transferase(Phosphotransferase) domain 1 417 633 - -
Bisa11g1620 643 Pfam Protein kinase domain 374 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1620 643 MobiDBLite consensus disorder prediction 239 262 - -
Bisa11g1620 643 Gene3D Phosphorylase Kinase; domain 1 318 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1620 Bisa-ChrBisa11 37007048 37008979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1620 10 630 Receptor kinase-like Gene Family AT2G23770 44.392 1.69e-177 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa11g1620 Pkinase 8.5e-41 CL0016