Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1617 ATGGACCGGGCGGAATTAACTACAGAACAAGTTCTGAGGAGGGATATCCCATGGGAGACGTACATGAGCACTAAGCTGATCTCAAGCACAAGCCTTCAGCTATTGAGGCGTTATGATCATAAATCACAAAGTCAAAGAGCACAGTTGCTTGATGATGCTGGTCCAGCTTATGTACGTGTATTTGTTCATGTATTGCGTGATATACATAAAGATGAAACAGTGGAATATGTTCTGGCCCTAATACATGAAATGCTTACCGCCAACCCAAAAAGAGCAAGACTGTTTCATGATAAGTCCCTTGCAGATGATGATGCCTATGAACCTTTCTTAAGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTGATAGTTAGTGCTCGGCCAAAAAATCAGCACAGCAGCGTTGCAAATGGAGAAGCATCAATCTCAAAGAAGCCATTTATTACTATTGATGATGTTTTAAAAGAATTGGTAAAATGGCTTTGTGAACAGCTGAGGGACCCTTCTCATCCTAGTCGAGGTGTGCCAACTGCTATCAATTGTTTGGCAGCTCTACTTAAGGAACCTTTGGTTAGGTCTTCCTTTGTTCAGGCAGGTGGGGTCAAGTTGCTTGTACCATTGATTTCTCCAGCATCCACCCAACAGTCTATTCAGCTCCTATATGAAACGTGTCTCTGCATATGGCTTTTATCCTATTATGAACCGGCAATTGAATACCTGGCTACTTCGAGAACCCTTCCACGACTTATTGAGGTCGTTAAGAGTTCCACTAAAGAAAAGGCTGTTAGAGTAGTCGTCTTGACCTTTAAAAACTTGCTGTCAAAAGGGACATTGGGTGTTCAAATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTAGAGGCGCTGAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTAAGTTCCTTTGATAAGTATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCACAAGGATCCCATATTCTGGAGAGAAAATATTACCAGCTTTGAAGAAAATGACTTTCAGATTGTAAGGGTCCTTTTAACAATTTTGGACACATCCAATGATCCAAGGACTCTGGCTGTCGCTTGCTTTGACCTTTCACAGTTCGTTCAACACCATCCTGCGGGGAGGATCATAGTGACAGACCTTAAAGCCAAGGAACGAGTGATGAAACTAATGACTCATGAAAACGCTGAGGTTACTAAAAATGCACTGCTCTGTATCCAACGGCTCTTTTTAGGAGCAAAGTATGCAAGCTTTTTGCAGGCCTAA 1344 0.4189 MDRAELTTEQVLRRDIPWETYMSTKLISSTSLQLLRRYDHKSQSQRAQLLDDAGPAYVRVFVHVLRDIHKDETVEYVLALIHEMLTANPKRARLFHDKSLADDDAYEPFLRNWFIQEKSCKILALIVSARPKNQHSSVANGEASISKKPFITIDDVLKELVKWLCEQLRDPSHPSRGVPTAINCLAALLKEPLVRSSFVQAGGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIEVVKSSTKEKAVRVVVLTFKNLLSKGTLGVQMVDFQLPQVVQNLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSPMHKDPIFWRENITSFEENDFQIVRVLLTILDTSNDPRTLAVACFDLSQFVQHHPAGRIIVTDLKAKERVMKLMTHENAEVTKNALLCIQRLFLGAKYASFLQA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1617 447 Gene3D - 5 326 IPR011989 -
Bisa11g1617 447 Pfam V-ATPase subunit H 5 318 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bisa11g1617 447 FunFam V-type proton ATPase subunit H 338 439 - -
Bisa11g1617 447 PIRSF V-ATP_synth_H 1 446 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bisa11g1617 447 Gene3D - 339 439 IPR038497 -
Bisa11g1617 447 SMART arm_5 236 277 IPR000225 GO:0005515
Bisa11g1617 447 SMART arm_5 190 235 IPR000225 GO:0005515
Bisa11g1617 447 SMART arm_5 397 437 IPR000225 GO:0005515
Bisa11g1617 447 SMART arm_5 43 86 IPR000225 GO:0005515
Bisa11g1617 447 Pfam V-ATPase subunit H 324 436 IPR011987 GO:0000221|GO:1902600
Bisa11g1617 447 SUPERFAMILY ARM repeat 8 437 IPR016024 -
Bisa11g1617 447 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 446 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1617 Bisa-ChrBisa11 36981129 36997503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1617 1 447 Primary Pumps ATPases(2) AT3G42050 76.549 0.0 719