Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1611 ATGGGAATAGCAACACCGCCAGTTCCATCGATTCTCTCTCACTCAAGAACCCTCCATCATTCCTTTCTGGACAGTAAGTACGATTGCTCGAATTCTATGTCCCAAGAGTATCACCACCAAGGAATCTTCAGCTTCTCGAATGGGTTCGAGAGATCCACTGTAACTCACCAAGACCACCCACAGCAGATCCGGAGGGACAAAGTGAGGGTGCAAGGATTCGACCCTCCACCTCCCTTAGTCGGCATCGAGGAAGAGGAATCCGGAGGCCTTCCGGTTTACGAAACCGCAGGAATGTTATCTGAGATGTTCAATTTCCAGCCCGCCGGCGCCTCCGCCACCGAATTGCTCGAACACCAACCCATGACGACGACGTTTCGCTCCACCAGCAGGCCTCAAGGCAGCGACTGGTATGGAAACCGACAAGCCATCATGAGTGGTTTGGGAGATTCCAAGAATGACCAACACCAGCATCGTCAGATTTCGAGCATAAATGCTGAGTCAGCTGCAGCCATGCAGCTTTTTCTGATGAACCCTCAAACGAGATCGCCTTCCCCTCCTCACACTAATTCCTCCACCCTCCACATGTTGCTGCCCAATCCCAATTCCTCTTCTCTGCAGGGGTTCAGTGGTGGAGGTGGAGGGGGTTTTGGTCAATTCACATGGGTTCCGGAAGGTTCTCAAGAAGGAGGAGCCACCGCCAACCCTGGGGAGATCGGAGGGGTGGTGGAAGGGCAAGGACTATCCTTGTCGTTGTCGTCGTCGATGGAAGCGGCGAAAGCGGAGGAGTTCAGGATGGGGGACACCGGGTTTCTCAATTATTACAATCAAGCAGGGTCCTCGTCTGCTCACTATCCGTACAAGAATTTGGGAGGTCAAACCCAAACCCAAACCCAAACCCAAGCCCACTCACTGCATTTACAGCCTCAGAGCCACCAACTTCATCATTTGGGTTTCGGATCCTCCCTGGGGGTGGCCAATGTTCTCAGGAACTCCAAGTATGTGAAACCGGCTCAAGAATTGCTCGAAGAATTCTGCAGCGTCGGGAGGGGTCAGTTCAAGAAGAGTAAATTCAATAGGCAAAACTCTAACCCTAATAATTCCTCCAATCAGGCTGGTGCTCCTCCTGCTGCTTCCTCTTCTTCCACTAAAGATCCTCCTCCTTTGTCACCCGCCGATAGGATAGAGCATCAGAGAAGGAAGGTCAAACTGTTATCCATGCTTGACGAGGTGGACCGAAGATACAACCACTACTGTGAGCAAATGCAAATGGTGGTGAACTCGTTTGACTTGGTGATGGGGTATGGGGCGGCGGTGCCGTACACGGCGCTGGCACAGAAAGCAATGTCGAGGCATTTCCGGTGTCTAAAGGATGCAGTATCGGCTCAGCTGAAGCACAGTTGCGAGTTGTTGGGTGAGAAAGATGGGATGGGGTCGTCAGGTTTGACCAAAGGTGAGACTCCGAGGCTGAAGCTGCTGGAGCAAAGCCTGAGACAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAGCAGGAGGCCTGGAGACCCCAGCGAGGCCTCCCTGAACGATCTGTCAACATTTTGCGAGCCTGGCTCTTCGAGCATTTCCTCCATCCGTATCCAAGCGACGCAGATAAGCATCTGTTGGCTCGACAGACTGGGTTATCGAGAAATCAGGTATCAAATTGGTTCATCAACGCGAGGGTACGGTTGTGGAAACCCATGGTAGAAGACATGTATCAAAAAGAAGTTAAAGAAGATGACGCAGAAGATAGAGAAAGGAACCACAGCAACAGCAACAGCAACAGCAACACCAGTGGGCACATAGCGCAGACTCCAACGGCCACAACATCTACAGCAACAGCGCCACCTCCTCCGACAACTCCAACAACACCTACAGCCAAAAGATCCGACGTCAATGCAACCGAAAGCGACCCTTCACTCCTCGCAATCAATAGACAACCCTTCTCGGAAAGGGAAAACCAAGCCACCACCATGGGCACCGTCACCGCCGCCGCCTCTGAGGTGACGCCACCCGTTTCTCAGCCTTTCGACTCAGACCTGTCAATGCCTGCGGATGACACGTGTCGCCATGGCAGCTTGGTTGTACCAGACTACGGGACCACCGCCTCTGCTGCTGCTGCTAACATTGGATCTACTCTCATTAGGTTCGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGCTACGCCACGCTGGCAACATTCCCGACACGACTCCTTTCTCTGTTAGAGACTTCGGAGGCATTTAA 2271 0.5302 MGIATPPVPSILSHSRTLHHSFLDSKYDCSNSMSQEYHHQGIFSFSNGFERSTVTHQDHPQQIRRDKVRVQGFDPPPPLVGIEEEESGGLPVYETAGMLSEMFNFQPAGASATELLEHQPMTTTFRSTSRPQGSDWYGNRQAIMSGLGDSKNDQHQHRQISSINAESAAAMQLFLMNPQTRSPSPPHTNSSTLHMLLPNPNSSSLQGFSGGGGGGFGQFTWVPEGSQEGGATANPGEIGGVVEGQGLSLSLSSSMEAAKAEEFRMGDTGFLNYYNQAGSSSAHYPYKNLGGQTQTQTQTQAHSLHLQPQSHQLHHLGFGSSLGVANVLRNSKYVKPAQELLEEFCSVGRGQFKKSKFNRQNSNPNNSSNQAGAPPAASSSSTKDPPPLSPADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGYGAAVPYTALAQKAMSRHFRCLKDAVSAQLKHSCELLGEKDGMGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQKEVKEDDAEDRERNHSNSNSNSNTSGHIAQTPTATTSTATAPPPPTTPTTPTAKRSDVNATESDPSLLAINRQPFSERENQATTMGTVTAAASEVTPPVSQPFDSDLSMPADDTCRHGSLVVPDYGTTASAAAANIGSTLIRFGTTAGDVSLTLGLRHAGNIPDTTPFSVRDFGGI 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1611 756 Pfam Homeobox KN domain 530 569 IPR008422 GO:0003677|GO:0006355
Bisa11g1611 756 MobiDBLite consensus disorder prediction 584 662 - -
Bisa11g1611 756 MobiDBLite consensus disorder prediction 355 386 - -
Bisa11g1611 756 SUPERFAMILY Homeodomain-like 515 579 IPR009057 -
Bisa11g1611 756 MobiDBLite consensus disorder prediction 631 662 - -
Bisa11g1611 756 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 276 599 - -
Bisa11g1611 756 SMART HOX_1 513 577 IPR001356 GO:0003677
Bisa11g1611 756 SMART prehox3 322 461 IPR006563 -
Bisa11g1611 756 MobiDBLite consensus disorder prediction 597 617 - -
Bisa11g1611 756 Gene3D - 516 578 - -
Bisa11g1611 756 FunFam BEL1-like homeodomain protein 4 516 578 - -
Bisa11g1611 756 CDD homeodomain 513 574 IPR001356 GO:0003677
Bisa11g1611 756 MobiDBLite consensus disorder prediction 355 397 - -
Bisa11g1611 756 Pfam Associated with HOX 327 460 IPR006563 -
Bisa11g1611 756 ProSiteProfiles 'Homeobox' domain profile. 510 573 IPR001356 GO:0003677
Bisa11g1611 756 MobiDBLite consensus disorder prediction 285 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1611 Bisa-ChrBisa11 36934938 36940567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1611 322 754 Homeobox Transcription Factor Family AT2G23760 54.361 3.84e-156 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa11g1611 POX 4.8e-52 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1611 11 36934938 36940567 Bisa01g1909 01 33372683 33378980 CCT
Bisa11g1611 11 36934938 36940567 Bisa11g1611 11 36934938 36940567 ECH
Bisa01g1909 01 33372683 33378980 Bisa11g1611 11 36934938 36940567 ECH