Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1568 ATGAATGAACAGTCGCGATACAGGCTCAGATCTCTAAAGATCATAAAGAAGATGATCCAGGAACTGTTGGGTGGTGCTGCTCTCATAGCAGGCGAAAGGAAAATCTCCATCAACGGAGGCGGAGTAGCAGCATTAGTATCTCCTGGTGCTTCTCTCTCTTCTTCTTCTCCATCTCCTTCTTCCACCACCACCACCACTACCACCAACACTTCTACCAACGTCGCCGCCGCGGGGTCAACAAACTCTGAGAACCAGAACTTGAGGTGCCCGAGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACACAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGCGCTCTCAGGAACGTTCCGATAGGCGGCAGCTGCCGGAAGAACAGGAACGTCAGCGCTTCCAACTCTGTTGCCAAGACGAGCGTGGCCAAGATGAAAACCGTTTCAGTGGCAGCGTCTGAGCTGGAAAGGTCGGTGCTTGGGGTGGCCAGGTTCATGGACCACGACCTTCCGACGTCGAGCCCGGTTCTGTGGGGGCCTCCGCAAAACTCTCATCTGTTGGCGCTGCTTAGAGCTAGCCAAAACCCTAACCCTAACCCTAGCAGTCCCAACGTGTCTGTTAATGGTGTTAAGGAAGAAGGGAGCTTGATGGGGTCTCGCACGGTGACTGAGCCAATGGTGGCGAATGGGTTAGTGAGTGGACGAGCCCTAGGGTTTGATACTGTTGGGCAATTTCCTACGCTTGGGCTGTGTGGCTCTGTTTGGAGAAACAATAATTGCAATAATAATGAAGACGGTACGTTTTTACTTGGAGAACATCATCAGAGCAGTGGGATTCAAGAACTGTACCAGAGGCTGAGGTCATCGTCGGTCAATTATTGTAGCGACAATGTTAACTCACAAGTTTTTATTGGGAACATGGTTGCTTCTTCTTCGTCGTTATCATCATCATCATCTTCTTTGTCCATTTTGGAGTCAGCTCCAGCAGTTGCCGGGGATGATCAATTGGGGTACACTACCTGGAATCCAACATTCTCGTGGTCTGATCCTCCAACAACCAATGGTACTGCATATCCTTAA 1113 0.5031 MNEQSRYRLRSLKIIKKMIQELLGGAALIAGERKISINGGGVAALVSPGASLSSSSPSPSSTTTTTTTNTSTNVAAAGSTNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGSCRKNRNVSASNSVAKTSVAKMKTVSVAASELERSVLGVARFMDHDLPTSSPVLWGPPQNSHLLALLRASQNPNPNPSSPNVSVNGVKEEGSLMGSRTVTEPMVANGLVSGRALGFDTVGQFPTLGLCGSVWRNNNCNNNEDGTFLLGEHHQSSGIQELYQRLRSSSVNYCSDNVNSQVFIGNMVASSSSLSSSSSSLSILESAPAVAGDDQLGYTTWNPTFSWSDPPTTNGTAYP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1568 370 ProSitePatterns Zinc finger Dof-type signature. 89 125 IPR003851 GO:0003677|GO:0006355
Bisa11g1568 370 ProSiteProfiles Zinc finger Dof-type profile. 87 141 IPR003851 GO:0003677|GO:0006355
Bisa11g1568 370 Pfam Dof domain, zinc finger 85 141 IPR003851 GO:0003677|GO:0006355
Bisa11g1568 370 MobiDBLite consensus disorder prediction 48 88 - -
Bisa11g1568 370 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 77 272 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1568 Bisa-ChrBisa11 36453764 36457905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1568 46 151 C2C2-Dof Transcription Factor Family AT5G65590 53.774 3.17e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa11g1568 zf-Dof 1.2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1568 11 36453764 36457905 Bisa11g1568 11 36453764 36457905 ECH