Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1554 ATGTTAGCGAGACACAGTCACAGAGAATACCCCAGGATGGAGCTGAGCTTGGATTTGAGTCTATCTTTTGTTCCCAAAACCATCTCTGAGTTCCTCGGAGAGGTTTCTAGGAGCAGAGATAAGTACGAGAAATTGACGATGCTTGACGATTTTTTGAAGAGATTGGAAGATGAAATGAAGAAGATCGAGGCCTTCAAACGCGAGCTTCCTCTCTGCATGCTCCTTGTAAACGATGCTATAGCGAGGTTGAAGGAGGAGAAAGTGCAGTGCGTGGAAATGCAAGATCGACCAGAGATAGAGGAATTCATACCACTGAAAGCAAATTCAGGAGAAAATGGGCAATTAACTATGGAAAAGGATAGTTGTGACAAGAAGAACTGGATGAGCTCTGCTCAGCTGTGGAGCACTGAAACCAAATCGAGAAGCGAAGATGATCGGTCGGTGCCGGAGAATCCAATTCAGTCGCGGAATCTGAAAAACAGGGGAGGGGCATTTATCCCCTTTAATGGGAATCTGTGTATGGCAAAGCCAGGAACGAAGGAAGACAAGGAAATTTCACAAGTTTCTAGCCTTAGCTTGATGCCTCCAGCTTCTGAACTGAATCACAACAATTCAAAAAGTGGTAGCAGAAATAGTTCGGGTTCGTCTTTCCTCGCAGGCCAGCCCCAGCCGCCACATTTGCAACAGAACCCTAGGAAACAAAGGCGATGCTGGTCGCCGGAGCTTCATCGGCGTTTCGTTGATGCGCTTCAACAACTCGGTGGAGCACAAGTGGCCACTCCTAAACAGATCAGAGAACTAATGCAGGTGGAAGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGACTTCATGTAAGAAAACTTCCTGCTTCATCGATGGGGCAAGGTAATAGCCTATGGACGGTGGAGGATCAATGTGGAGATAAATCGAAGGTGAACTTATCGCAGTCTGGTTCTCCACAAGGTCCTCTTCTCCTTGGAGGTTCTGCCAAGGGTCTATCGAGCTCTGGAGATGGCGAAGAAGATGAGAAATCAGATTGCCACAGTTGGAAAGGTGAACTTCACCAGCAGGCAGAAGCCGATGTAATGTCATAA 1107 0.4679 MLARHSHREYPRMELSLDLSLSFVPKTISEFLGEVSRSRDKYEKLTMLDDFLKRLEDEMKKIEAFKRELPLCMLLVNDAIARLKEEKVQCVEMQDRPEIEEFIPLKANSGENGQLTMEKDSCDKKNWMSSAQLWSTETKSRSEDDRSVPENPIQSRNLKNRGGAFIPFNGNLCMAKPGTKEDKEISQVSSLSLMPPASELNHNNSKSGSRNSSGSSFLAGQPQPPHLQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRKLPASSMGQGNSLWTVEDQCGDKSKVNLSQSGSPQGPLLLGGSAKGLSSSGDGEEDEKSDCHSWKGELHQQAEADVMS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1554 368 MobiDBLite consensus disorder prediction 315 368 - -
Bisa11g1554 368 Coils Coil 76 96 - -
Bisa11g1554 368 MobiDBLite consensus disorder prediction 340 359 - -
Bisa11g1554 368 Gene3D - 232 289 - -
Bisa11g1554 368 Coils Coil 48 68 - -
Bisa11g1554 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 290 IPR017930 -
Bisa11g1554 368 MobiDBLite consensus disorder prediction 177 235 - -
Bisa11g1554 368 SUPERFAMILY Homeodomain-like 231 291 IPR009057 -
Bisa11g1554 368 Pfam Myb-like DNA-binding domain 235 286 IPR001005 -
Bisa11g1554 368 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 288 IPR006447 GO:0003677
Bisa11g1554 368 MobiDBLite consensus disorder prediction 184 235 - -
Bisa11g1554 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 355 IPR044787 GO:0003700|GO:0006355
Bisa11g1554 368 MobiDBLite consensus disorder prediction 133 162 - -
Bisa11g1554 368 FunFam Myb family transcription factor 232 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1554 Bisa-ChrBisa11 36219784 36221510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1554 12 283 G2-like Transcription Factor Family AT4G37180 44.964 9.12e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa11g1554 Myb_DNA-binding 1.5e-06 CL0123