Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1552 ATGTCATCATCGAATTCTCCGTGCGCTGCGTGCAAGTGTCTGAGGCGGAAATGCACACAAGAATGCGTGTTCGCGCCGTACTTCCCACCGGACAACCCTCAGAGGTTTGCTTACGTCCACAAGGTTTTCGGCGCAAGCAACGTCGCCAAGCTTCTCAATGAGCTCAACGCTGCCCAGCGAGACGACGCCGTTAAGTCTCTGGCTTACGAAGCCGAGGCCCGTCTCCGGGACCCTGTGTATGGTTGTGTGGGTCTCATCTCCATCCTCCAGCACAGACTCAGGCAGATCCAAGTCGAACTCAACAATGCCAAGAAGGAGCTCGCTACGTATATTGGGCCTCAGGCTCTTCAGGCCATGCCTCCCACCATTTTGACACCATCTGGAGTGGTCCCACAACAGCATCATGGCAACCCATATTCTTCCACCACCGCCTATCCCTACAACAACATGCCACAGCCTCCTTCGGTGACTAATATTCTGACCGGTGCTTCTTCGCATAGCATGGTGATTCGTGACCCTTCGCAACAGCATCAGATCTTGGATGCTCAGCAATTGGCTGCGGCTGTGGCGAGAGAGCAGCAGGATGTGTTTCGAGGTTATGAGCAACAACAGCAAGACTTTATGAGGTTCAATAGTGGATATGAAGTGGGTTCGGTTTCTGGGAGTGGATTCAACAACCAGATGTCTACAACTGCTGCCCCGACTGATATGTCTCCATCCTTGGCTCTGGGCACCTTTGACAGCCCTTACCAGATGCAACCACAGCAAACTGAACATCATCACCCTCATCACCATCAGCTTCAGGCACAGCTAATGCTTTCACCCCAGCAATCACAACCACTGCAACAAACCAATCAGTCACAGCAACCGCATCCGCAACAGTCAGAAAGCGAGGAAGGTAGGAGTGGCATCGGTCTTTCTTGTTGA 927 0.5264 MSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISILQHRLRQIQVELNNAKKELATYIGPQALQAMPPTILTPSGVVPQQHHGNPYSSTTAYPYNNMPQPPSVTNILTGASSHSMVIRDPSQQHQILDAQQLAAAVAREQQDVFRGYEQQQQDFMRFNSGYEVGSVSGSGFNNQMSTTAAPTDMSPSLALGTFDSPYQMQPQQTEHHHPHHHQLQAQLMLSPQQSQPLQQTNQSQQPHPQQSESEEGRSGIGLSC 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1552 308 MobiDBLite consensus disorder prediction 269 302 - -
Bisa11g1552 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 285 - -
Bisa11g1552 308 Coils Coil 86 106 - -
Bisa11g1552 308 MobiDBLite consensus disorder prediction 225 256 - -
Bisa11g1552 308 MobiDBLite consensus disorder prediction 225 308 - -
Bisa11g1552 308 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Bisa11g1552 308 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1552 Bisa-ChrBisa11 36182417 36183343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1552 1 304 AS2 family AT5G66870 50.152 9.41e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa11g1552 LOB 7.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1552 11 36182417 36183343 Bisa11g1552 11 36182417 36183343 ECH