Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1551 ATGCGTTGGTTACCTTCTCTTTCCTTTCCCCATGTCGCTCTCAAATCCTCCTCTTCCTCTTCCACTTTACGCGCCTCCGACGTTGACCACCCTAAGAAAAAACCGGCCGACACCACCCGCACCCCGGGTGGCGTTTGGCCTTTCGGTAGCAGCAAAAAGTCCGGTCGCCCCTTGAAGCTCGCCGATGGCAAGTCCCCTCCCAGGGGGCACGAGTCCGACGAAGACGCTGTGGGGCCTTTGACTCGTTCCCCCTCCTCCTTTGACCGCCTTTTCCATCGCTCCAGTGCGTCCTCATGCTCTACCTCTTCCGTTGTGCCTCAACCGTTGCCCTTGCCGGACTCTGCCTTCCCTCGCCAGAAAGACGGCGATTGCCCTTTGCCTTCACCTAAGGAGCTGACTAGGCCAAGCAGTACCGGCAAACTGCTCGAAGAGCGCGATCGAGGTGGCCTTATGGACGGAGTATCCTCTGTTCTTCGAATTCGGAGTGTTTTTGCAAGCAAAGACGCGGGAAAGAATGTGGAGCAAGCGGACACAAGGTCATCAAGGACTATGCGTCAGGATCTGTGTCTTTCGGAAGGCCGTCGAGATAACTTCCGCGTCAATGTCCCCACTAGGAGTGCTCCAACTAGTCCTATGGGCGGCAGTCCTTTAGTGAGCCCAAACGAAGGGAGAAATAGTGATTCTGTTCAATATCATTATGTGTCTCACATAGCAAATCAATTCTGGTCTGCACCAGAGATGCCTACCTCCGAAGCAGGGACTATATCTCCGGCATTCTTGGATTTAACCGACACTTGTCCTCTCCACAGTCCACGGAGCAGAAGTCCTCACCGACGCCAGAGAAGCTCAAGTGGAACTTCCTCTCCTATACATCCCATGTCATCCCTCGAGATCTCACCAGCTCGTCGTGACTTAAGTGCCTTCCCTCTTACTGTTCACCCCTTACCATTGCCTCCTGGAGCACCCATGGTTTCCCCTGGTAATAGACCTTCCCCAACTAAGCCTAAGCCGGAGTCCTCCTCCATGAAAAGCCAATGGCAGAAAGGGAAACTAATTGGGCGGGGTACATTTGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTATGTGCTATGAAGGAAGTAGAAATATTTCCTGATGACCCCAAATCCGCAGAGTGTATAAAGCAGTTAGAACAGGAAATCTCAGTTCTTAGCCATCTGAAACATACAAACATTGTGCAGTACTATGGTAGTGAAATTATTGAAGACCGGTTTTATATTTATCTGGAATATGTCCATCCCGGGTCAATTAATAAATATGTCCGTGAACATTGTGGTGCCATGACGGAATCGGTTGTTCGAAATTTTACTCGCCATATTCTTTCAGGGCTGGCTTACTTGCATAGCAAAAAAACAATTCACAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTACTGGGGTTGTCAAGCTTGCTGACTTTGGGATGGCCAAGCATCTTACTGGACATGTAGCTGATCTTTCTTTAAAGGGAAGCCCATACTGGATGGCTCCCGAGCTTATGCAAGCAGTGATGCAAAAAGACAACAGCTCTGATCTAGCTTTTGCTGTTGATGTTTGGAGTTTGGGTTGTACAATCATAGAAATGCTCACAGGGAAGCCTCCTTGGAGTGAGTACGAAGGAGCTGCAGCTATGTTTAAGGTTATGAAGGATACACCTCCTACACCTGAAACATTGTCACCAGAGGGGAAAGATTTCCTGAGGTGCTGCTTTAAGAGAAATCCAGCAGAGCGGGCAACTGCTTCTGCTTTGCTTGAACATCGATTCTTGAAAAACCCACCACAGCCAGATGTTTCATGA 1851 0.4938 MRWLPSLSFPHVALKSSSSSSTLRASDVDHPKKKPADTTRTPGGVWPFGSSKKSGRPLKLADGKSPPRGHESDEDAVGPLTRSPSSFDRLFHRSSASSCSTSSVVPQPLPLPDSAFPRQKDGDCPLPSPKELTRPSSTGKLLEERDRGGLMDGVSSVLRIRSVFASKDAGKNVEQADTRSSRTMRQDLCLSEGRRDNFRVNVPTRSAPTSPMGGSPLVSPNEGRNSDSVQYHYVSHIANQFWSAPEMPTSEAGTISPAFLDLTDTCPLHSPRSRSPHRRQRSSSGTSSPIHPMSSLEISPARRDLSAFPLTVHPLPLPPGAPMVSPGNRPSPTKPKPESSSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEISVLSHLKHTNIVQYYGSEIIEDRFYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELMQAVMQKDNSSDLAFAVDVWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMKDTPPTPETLSPEGKDFLRCCFKRNPAERATASALLEHRFLKNPPQPDVS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1551 616 MobiDBLite consensus disorder prediction 1 148 - -
Bisa11g1551 616 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 42 614 - -
Bisa11g1551 616 MobiDBLite consensus disorder prediction 263 295 - -
Bisa11g1551 616 SUPERFAMILY Protein kinase-like (PK-like) 341 613 IPR011009 -
Bisa11g1551 616 MobiDBLite consensus disorder prediction 11 25 - -
Bisa11g1551 616 MobiDBLite consensus disorder prediction 280 294 - -
Bisa11g1551 616 MobiDBLite consensus disorder prediction 318 347 - -
Bisa11g1551 616 Pfam Protein kinase domain 347 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1551 616 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Bisa11g1551 616 MobiDBLite consensus disorder prediction 318 333 - -
Bisa11g1551 616 Gene3D Transferase(Phosphotransferase) domain 1 342 615 - -
Bisa11g1551 616 MobiDBLite consensus disorder prediction 202 225 - -
Bisa11g1551 616 FunFam Mitogen-activated protein kinase kinase kinase 5 343 616 - -
Bisa11g1551 616 MobiDBLite consensus disorder prediction 200 225 - -
Bisa11g1551 616 ProSiteProfiles Protein kinase domain profile. 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1551 616 MobiDBLite consensus disorder prediction 87 108 - -
Bisa11g1551 616 SMART serkin_6 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1551 616 MobiDBLite consensus disorder prediction 57 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1551 Bisa-ChrBisa11 36143409 36149716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1551 134 613 MAP Kinase Kinase Kinase AT5G66850 60.861 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa11g1551 Pkinase 4.2e-68 CL0016