Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1522 ATGGCGGTGGGTCAGGGAAAAATCCGCCCTTCGCTGGATCGGAGGGTTAAGAAGGAGGTCAGGGATCATCGTCACTACGACGACCCTCAAGCTTCTAGGGCTGCCGGAAAAGCCGCTTCTCCGTTGTGGCACGGTGAGGATGCGCAGGACGATAACTTAACTCTCGCCAATTGGTCCCACACCCTACCATGCCTGTCTCCTTCAACCACGGACAAACGAAATAAGACGGTGGAGAATCAATACAAGCTCTTGAACATTCCCAAAGCCATATCTGATCAGGCACAAAGGTTTACAAGCTCCATTAAGGGTTCACCAGAGAGGGCATTATCTCCAGGTCAGGGCAGGTCAACTGCTGTGATCCGAGCAGAGGCAATCCGATCAAAGTTGGAACCAAGGTTCCCTAGCTTTGCGAAGTCATTAGTTAAATCACATGTTGCAGGTTGTTTTTGGATGGGGCTCCCTGTGTTGTTCTGTAAAAAACATTTACCGGATAAGGATGCAGCAATTACCTTGGAAGATGAACATGGTAAAGAATATCAGTTGAAATTCATTGCATACAAGACAGGTTTAAGTGCTGGTTGGAGACAGTTTTCAACTATGCACAAATTGCAGGAGGGAGATGTTCTGGTCTTCCAATTAGTTGAATCTACTAGATTTAAGGTATATATAATAAGAGCTAATGGTTCGAGTGAACTGGATGGTGCATTTCCCCTTCAGAATTTGGACAGTTATGCAAAACAAAAATCAAGAGATAACGCAAACGCTGATGCTCTACCTGGTAATAGCTCAAAGAGGAAATTTGCAAAACCTGACTCAACTCCAGCTCTCCAAATGAAGAAAAAGATTAACCTTTCAAGATTTTCTCCCAAGGTTGGGCAGTCTGCAGAGCCATTTGAATATGAAAGTGATGAAGCTTCAGAACAGGAGGGCTTTGCGACAGTGCTCAACTTCAAGGATGTAAAAAGTTTTGAGAATTTCATTATTCTAATAGATGGAATGCAGATAGATTCTGAGCTCCCCCTTGAGGTTAGAAATAAGTACTATAAGCTCTGCTGTAGCCAGAATGCGTTTCTACATGAGAATCTCATCAAGGGCATGAGCTATAACCTTATTGTTGGCATTATACTTGAAGTTGTCAACATTGCAGATGCCATGAGAGCCAGCTCACTGTTTACCTCGCCCAATGAATTCGCTAAGTGGGATGAAGAGTTGATAGCCTTTCAGCATTTAGGGATGAATGTGGAGTTTTTAAGACAACGGTTACATCGGCTTGTAAATGTTGCCTATCAGACAGAAGATGCCTCAGAAACCAGACAGTACTTGGTGTCTAGGAATGAACTCAGTCGCGCAGATAATGAAATAATGAACATTGAAACAAAGCTGGAAGAATTGAAAGGAGCTTGTGATGATTTTGGTGCTTACCTTGATAGTTTGAAGCACAAAGCTGAGCGCTACTATCACAAGTTTGAGCAAGAGGTCACTGCTCCTTGGTAA 1494 0.4344 MAVGQGKIRPSLDRRVKKEVRDHRHYDDPQASRAAGKAASPLWHGEDAQDDNLTLANWSHTLPCLSPSTTDKRNKTVENQYKLLNIPKAISDQAQRFTSSIKGSPERALSPGQGRSTAVIRAEAIRSKLEPRFPSFAKSLVKSHVAGCFWMGLPVLFCKKHLPDKDAAITLEDEHGKEYQLKFIAYKTGLSAGWRQFSTMHKLQEGDVLVFQLVESTRFKVYIIRANGSSELDGAFPLQNLDSYAKQKSRDNANADALPGNSSKRKFAKPDSTPALQMKKKINLSRFSPKVGQSAEPFEYESDEASEQEGFATVLNFKDVKSFENFIILIDGMQIDSELPLEVRNKYYKLCCSQNAFLHENLIKGMSYNLIVGIILEVVNIADAMRASSLFTSPNEFAKWDEELIAFQHLGMNVEFLRQRLHRLVNVAYQTEDASETRQYLVSRNELSRADNEIMNIETKLEELKGACDDFGAYLDSLKHKAERYYHKFEQEVTAPW 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1522 497 Coils Coil 447 467 - -
Bisa11g1522 497 MobiDBLite consensus disorder prediction 249 273 - -
Bisa11g1522 497 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 83 227 IPR044837 -
Bisa11g1522 497 SUPERFAMILY DNA-binding pseudobarrel domain 129 228 IPR015300 -
Bisa11g1522 497 ProSiteProfiles B3 DNA-binding domain profile. 136 227 IPR003340 GO:0003677
Bisa11g1522 497 MobiDBLite consensus disorder prediction 1 45 - -
Bisa11g1522 497 SMART B3_2 136 227 IPR003340 GO:0003677
Bisa11g1522 497 Pfam B3 DNA binding domain 136 226 IPR003340 GO:0003677
Bisa11g1522 497 MobiDBLite consensus disorder prediction 10 31 - -
Bisa11g1522 497 Gene3D - 114 228 IPR015300 -
Bisa11g1522 497 CDD B3_DNA 134 225 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1522 Bisa-ChrBisa11 35416975 35420328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1522 107 254 B3 DNA Binding Superfamily AT3G19184 43.624 4.35e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa11g1522 B3 2.5e-15 CL0405