Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1504 ATGTGGGAGGGAGTTGATTTGTCCGGTTTATTCAGTTGGTTTAGACATACGAAAAACGGTCTGATTAGGTTCCCGGTTCGAAATCAAGCCGACGGACGAGTGGTTGCCGACACGAGAAAGTCCAGCGGCGAGAGAGTTAAGTTAGAGAGATTGATAGAGAAGGAGATTTGCATTATAGGGTTTTGCTTTTTCCAGAGATTCCAAGGGAGCGAGAGTGAGAGATTTAGAGGGAGAGAGGTGAGAACGCTGAGTGCTGAGCTGAGAGATTCCCAAGAGGAGGAGCTGTCGATTCCCTTTCGTTGTGCCTTCTCAAACATTCTCATGGAGCAGCGAAAGCTTGTGGTTCTGGGTATCCCTTGGGAAGTCGATACTGAGGGGTTGAGAGAATATATTAGCAAATTTGGTAAGCTGGAAGATTGTATTGTCATGAAGGAGAGGCCAACTGGTCGATCTCGTGGTTTTGGATATGTTACATTTGCATCAATTGATGATGCTAAGAATGCACTGTCCAGTGAACACGTTCTTGGCAACAGGATACTAGAAGTTAAAGTAGCCACACCAAAGGAGGAGATGAGGGCAACAGTCAAAAAAGTTACCAGAATTTTTGTGGCGAGGATTCCACAATCTGTTACGGAAGAAACTTTCAGAAAGTAG 654 0.4511 MWEGVDLSGLFSWFRHTKNGLIRFPVRNQADGRVVADTRKSSGERVKLERLIEKEICIIGFCFFQRFQGSESERFRGREVRTLSAELRDSQEEELSIPFRCAFSNILMEQRKLVVLGIPWEVDTEGLREYISKFGKLEDCIVMKERPTGRSRGFGYVTFASIDDAKNALSSEHVLGNRILEVKVATPKEEMRATVKKVTRIFVARIPQSVTEETFRK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1504 217 SUPERFAMILY RNA-binding domain, RBD 110 216 IPR035979 GO:0003676
Bisa11g1504 217 Gene3D - 65 197 IPR012677 -
Bisa11g1504 217 SMART rrm1_1 112 183 IPR000504 GO:0003723
Bisa11g1504 217 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 113 172 IPR000504 GO:0003723
Bisa11g1504 217 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 109 216 - -
Bisa11g1504 217 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 111 187 IPR000504 GO:0003723
Bisa11g1504 217 FunFam heterogeneous nuclear ribonucleoprotein 1 109 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1504 Bisa-ChrBisa11 35264395 35266527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1504 110 188 C2H2 Transcription Factor Family AT2G19380 33.750 2.75e-09 54.7