Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1494 ATGGAGATGATGGCAGTGATGATGCAAATGGAGAAGTTCCCTGATCAATTCTCTGATCCATTCTTTGACACTTCCAATAATTACCCTGAAACAGAGCCCACTACTCTGCCCATATTCCCCAACCCTGATTCTCAAATTCAACAACCCAATATCTCACCACCTTCGCTACTACTTCAATCTCAACCCCATGAGGTAGCCTCAACGAGGCACAGAAATAATCCTTATCCATCATCATCAGAGAAGAGGAACTCAATGGAAGCCATGAGGGAAATGATATTCAGGATAGCAGTTATGCAACCCATTCATATAGACCCAGAGTTAGTAAAGCCACCGAAGCGAAGGAACGTGAAGATCTCGAAGGACCCTCAGAGCGTGGCAGCCAGGCACAGAAGGGAGAGGATAAGCGAGAGAATTAGGATTCTGCAGAGATTAGTTCCTGGAGGGACTAAAATGGACACGGCTTCTATGTTAGATGAAGCTATACATTACGTCAAGTTTTTGAAGAAGCAAGTGCAGACTCTGGAACAAGCAGGGGCTACTGGGCCTTCTGGTGTTGCTTTCAATGCTGGATCATTCTTAAATGCCAATAACAGTATTGTGAATTATTCTTCTTTCGTCAAGGGTTGCCAATTACCTCCTCCAATGGTGGGTTCTATCCAAATGCTCAGTTGA 672 0.4449 MEMMAVMMQMEKFPDQFSDPFFDTSNNYPETEPTTLPIFPNPDSQIQQPNISPPSLLLQSQPHEVASTRHRNNPYPSSSEKRNSMEAMREMIFRIAVMQPIHIDPELVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGATGPSGVAFNAGSFLNANNSIVNYSSFVKGCQLPPPMVGSIQMLS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1494 223 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 167 IPR011598 GO:0046983
Bisa11g1494 223 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 33 198 IPR045843 GO:0003700|GO:0006355
Bisa11g1494 223 Gene3D - 117 180 IPR036638 GO:0046983
Bisa11g1494 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 177 IPR036638 GO:0046983
Bisa11g1494 223 MobiDBLite consensus disorder prediction 24 83 - -
Bisa11g1494 223 Pfam Helix-loop-helix DNA-binding domain 127 167 IPR011598 GO:0046983
Bisa11g1494 223 CDD bHLH_AtIND_like 119 175 - -
Bisa11g1494 223 SMART finulus 124 173 IPR011598 GO:0046983
Bisa11g1494 223 MobiDBLite consensus disorder prediction 24 82 - -
Bisa11g1494 223 Coils Coil 157 177 - -
Bisa11g1494 223 FunFam BHLH transcription factor 121 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1494 Bisa-ChrBisa11 34973502 34974173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1494 1 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 59.113 9.79e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g1494 HLH 1.2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1494 11 34973502 34974173 Bisa11g1494 11 34973502 34974173 ECH