Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1493 ATGAGGAATTCCATGCAGTGGGAACGAGGAGCGTCCGTCGGTACCGGAAGCTTTGCTTCCGTCCACTTAGCGATTCCGAGGAGTACTTCTCCTCAATTTCCCTTCCCCACCGCCGTCAAGTCCTCCTGCGTTTTCACCTCTTCTTCCCTCGAGAACGAAGAACGCGTGCTTAACGGCCTTGGAGTCTGCCCTCAAATCATAAGGTGTTTCGGCCATGACTATACCTTCGAAAACGGTGAGGAGTACTGTAATTTGTTCCTGGAATACGCCGCCGGTGGTAGTCTCGCCGATCAGCTCAGAATTCGCGGGGGTCGATTACCAGAATCCGATGTGCGGCGATACACGAGGTCCGTCGTCGAGGGACTGAGACATGTTCACGCCAACGGATTCGTCCACTGCGATGTAAAGCTTGCGAACATTCTTTTGTTCGACAATGGCGACGTCAAGATTGCAGACTTTGGACTCGCCAAGAAGTCAGGGGAAAAGCAGAGCAACGAAGAAGCCAAGTGCGAGTTGAGGGGAACTCCTATGTGTATAGCTCCAGAATCAGTAAACGACAGCGAGTATGAATCTCCGGCCGATATATGGGCCCTCGGATGCACTGTGCTGGAGATGGTCACCGGAAAGCCGGCCTGGAGTTTCAAGGATGGATCCAATGTTTTCTCGTTGTTGATTCGGATTGGTGTGGGAGATGAATTGCCGGAGATTCCCGATGAATTATCAGAAGACGTAAAGGATTTTGTAAGAAAGTGTGTCGTGAAAGATCCAAGCAAGAGATGGACGGCGGAGATGCTTTTGAAACATCCCTTCGTCGCCGCGGACGAAACTGTTTCATTAAAGCAATTCAATGAGCCATCGACATCGCCAAGAAGTCACTTCGATTTGCCGGATTGGGTTTCCAATTCAACAGCTTCAGTTTTGAACTCGCCGGAATCCCATGATTGGTGCGAATGGGAATTTGAATCCTCGCGTTTGACTAGTATCTGTTCGCCGGAGGATAGGCTCCGGCAGCTGGTGACGAGTGACACACCAAATTGGTCGGATTCTGGCAGTTGGATTTGTGTTAGATGA 1071 0.5061 MRNSMQWERGASVGTGSFASVHLAIPRSTSPQFPFPTAVKSSCVFTSSSLENEERVLNGLGVCPQIIRCFGHDYTFENGEEYCNLFLEYAAGGSLADQLRIRGGRLPESDVRRYTRSVVEGLRHVHANGFVHCDVKLANILLFDNGDVKIADFGLAKKSGEKQSNEEAKCELRGTPMCIAPESVNDSEYESPADIWALGCTVLEMVTGKPAWSFKDGSNVFSLLIRIGVGDELPEIPDELSEDVKDFVRKCVVKDPSKRWTAEMLLKHPFVAADETVSLKQFNEPSTSPRSHFDLPDWVSNSTASVLNSPESHDWCEWEFESSRLTSICSPEDRLRQLVTSDTPNWSDSGSWICVR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1493 356 Gene3D Transferase(Phosphotransferase) domain 1 97 305 - -
Bisa11g1493 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bisa11g1493 356 Pfam Protein kinase domain 8 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1493 356 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 301 - -
Bisa11g1493 356 SMART serkin_6 7 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1493 356 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Bisa11g1493 356 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Bisa11g1493 356 ProSiteProfiles Protein kinase domain profile. 7 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1493 356 CDD STKc_MAPKKK 6 271 - -
Bisa11g1493 356 FunFam Mitogen-activated protein kinase kinase kinase 17 6 302 - -
Bisa11g1493 356 SUPERFAMILY Protein kinase-like (PK-like) 7 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1493 Bisa-ChrBisa11 34955228 34956298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1493 5 356 MAP Kinase Kinase Kinase AT3G50310 51.801 3.12e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa11g1493 Pkinase 4.8e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1493 11 34955228 34956298 Bisa01g1992 01 35031975 35033057 CCT
Bisa11g1493 11 34955228 34956298 Bisa11g1493 11 34955228 34956298 ECH