Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1489 ATGACGCAAGGAAGGACAACAAATTGGGAATTGACCCTCTGCACATATCGACAAAAGCCCATGGCTGAAAATATGCTTTCCATAGCCCAAAGAAGGGTCAAAAGAGGGAACAATCGACATGGGCCTAAATTTGATATAGAAGATAATGAAGCCCAATATCTTAATTACAAGCCCAACACTAAACTGCACAGAATGTTTGAAAAGAAGGCTAGATTCAATGTGCTTATTGAGGAAGAGAGGGAAACACAGGAGTCCTTGCCGACGAAGCTAGAAAAAATCGGGGATGCAAAGGACTTGGAGATGAAACATGCTAACGTGAGGACTGAGGACAGAAGACCATCCCATGGGCATAGCTCAGAGAACCGGAAAAAGGCAAAATCAGAGATTAGAACCACAATGTGGATTGGATTGTTCTTGTTTATGCGGGAGTTGTATTCATTTGTCTTTGGCCTTGTTTGTATTTTGTGTCTTGTTGTTGAGCATACTGGAGATATCACCCTTGTGGTGGAAATCACGATTAACTATCACACGGCCATGCCTGATCCTCCCACGCCTACAATGAACGACCAGCTCTCCAAACCCACCTCTATCTTCGGACTCCGCTTGTGGGTTGTTCTTGGCGTGTCTCTCGGAGCCGCCATTGTGCTGCTTCTCTTCCTCATCTCCATTTGGCTCGCTTCGAAGCGCTCCAAGACCAACTCTTCTCGCAGACCCTCCATTCCAGTCGTCTCCAAGGAGATCCAAGAGATTAGAATTGACCATCACCACCATTCCAAGCCAAACGGGACACGATTCCAGAACGAACCGTTTCCCGAGCCCGACCCAGTTCCCGGAATTGAACGGCAGGCTTTGCTACCAACGCCAGAGGATGAGAACCCGTCGGCGTACAACAGAATTCAGTTTGAGATTGGGAAGAATCATAGAATCTCATACCCTGAGCGTACCCTCGCTAGGTCGTCTTCGCACGGAAGTGGGGAGGCTCGACCCGTCGATCAGGTGCCGACGGTGATTCCTGAAGTTTCGCATTTAGGTTGGGGACATTGGTATACTCTTAGGGAGCTTGAGGATGCGACGAATGGGTTCGCCGACGAGAATGTTATTGGTGAAGGCGGCTACGGAATTGTTTACCATGGTATATTGAAGGACAACACTAATATTGCTGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGCAAGAGTTTAAGGTCGAAGTGGAAGCTATAGGAAGAGTCCGACATAAGAATTTAGTGAGGTTGCTGGGGTATTGTGCAGAAGGAGCTCATAGAATGCTTGTGTATGAGTATGTTGACAATGGGAACTTAGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGACCTGGGAAATTCGAACGAACATTATTCTGGGAACAGCAAAAGGGCTAACTTATCTTCATGAGGGGCTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATCCTGATTGACAAGCAGTGGAATTCAAAGGTGTCGGACTTTGGGCTTGCCAAACTCCTTGGCTCTGAGAGCAGCTACATTACAACCCGTGTCATGGGCACATTTGGATATGTAGCTCCTGAATATGCAAGTACTGGAATGTTGAATGAAAGAAGTGATGTGTACAGTTTTGGAATACTCATAATGGAAATAATTACAGGCAGGAATCCAGTTGATTACAGCCGGCCTCAGGAAGAGGTGAATTTAGTTGACTGGCTGAAGAAGATGGTAAGTGACAGGAAGGCAGAGGGAGTGTTGGATCCCAAGCTTCCAGAAAAACCAACATCAAGGGCACTAAAGCGAGCCCTTCTTGTTGCCTTGCGCTGCACTGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTCATACATATGCTTGAAGCTGAGGATTCCCCTCACAAAGAGGATCGTAAAGCTAAAAGGGATGCAGGACATTCGGCTAATGATAGAGCAGGGGATGGATTAAAAGAAAAAGTGACAACAGTATCTGGTGATGATGGTAGGATTGAAAGCGATATGCATGCCAGTGAGACAAGGTGA 2058 0.466 MTQGRTTNWELTLCTYRQKPMAENMLSIAQRRVKRGNNRHGPKFDIEDNEAQYLNYKPNTKLHRMFEKKARFNVLIEEERETQESLPTKLEKIGDAKDLEMKHANVRTEDRRPSHGHSSENRKKAKSEIRTTMWIGLFLFMRELYSFVFGLVCILCLVVEHTGDITLVVEITINYHTAMPDPPTPTMNDQLSKPTSIFGLRLWVVLGVSLGAAIVLLLFLISIWLASKRSKTNSSRRPSIPVVSKEIQEIRIDHHHHSKPNGTRFQNEPFPEPDPVPGIERQALLPTPEDENPSAYNRIQFEIGKNHRISYPERTLARSSSHGSGEARPVDQVPTVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYHGILKDNTNIAVKNLLNNRGQAEQEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRTNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPQEEVNLVDWLKKMVSDRKAEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPHKEDRKAKRDAGHSANDRAGDGLKEKVTTVSGDDGRIESDMHASETR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1489 685 Pfam Protein kinase domain 362 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1489 685 MobiDBLite consensus disorder prediction 252 293 - -
Bisa11g1489 685 Coils Coil 381 401 - -
Bisa11g1489 685 FunFam Probable serine/threonine-protein kinase At1g01540 341 436 - -
Bisa11g1489 685 CDD STKc_IRAK 367 633 - -
Bisa11g1489 685 SMART serkin_6 361 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1489 685 ProSiteProfiles Protein kinase domain profile. 361 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1489 685 Gene3D Phosphorylase Kinase; domain 1 340 436 - -
Bisa11g1489 685 FunFam Putative receptor-like serine/threonine-protein kinase 437 647 - -
Bisa11g1489 685 MobiDBLite consensus disorder prediction 105 124 - -
Bisa11g1489 685 MobiDBLite consensus disorder prediction 633 685 - -
Bisa11g1489 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Bisa11g1489 685 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Bisa11g1489 685 SUPERFAMILY Protein kinase-like (PK-like) 337 633 IPR011009 -
Bisa11g1489 685 PANTHER OS01G0323000 PROTEIN 186 648 - -
Bisa11g1489 685 Gene3D Transferase(Phosphotransferase) domain 1 437 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1489 Bisa-ChrBisa11 34935690 34941228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1489 338 655 Trihelix Transcription Factor Family AT1G70460 44.073 1.01e-84 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bisa11g1489 Pkinase 1.6e-47 CL0016