Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1485 ATGGGCGATATGTATAACTATGGTGGTACTAATACTAGTATCCATAACCATAACCACAACCCCTGTGCGTCTTCATCCTCTGTTCTTTCCTCGCCTTCACCTCAAGACGAAATCTCCCTTTTTCTGCGTCAGATTCTCCTTCGTTCCTCCTCCTCGTCAGCATCGTCGTCTTCGCTTATCACCCACACCGCCAGAAACGCACACGACTTTATGTCGTTTACGTCCATGGCTGGACTCTGCAGTTCCAACGCTGGGCTACAGAATGCTCGCCCTTCCGACCGATCATCGCTATTCCGAGATGAGATCTCGGCCGTTGATTCCTCTGCTGGAGTGAGCGCTTCGAATGATGCTTTTCTGTCCTCTTCGGGAACTTATAATTCCGCCAATATGAAGGGAAGCTCTGCTGTGAATGTGTCTTTGTCATCTTTCGGAGTGAGTGAGAATGAGATTGATGAGTATGATTGCGAGAGTGAGGAAGGGATTGAAGCACTGGTAGAAGAGCAGCCGGCAAAATCAGCCCCTCCCAGGAGTTCATCAAAGAGAAGCAGAGCTGCGGAAGTTCATAATTTGTCAGAAAAGAGAAGGAGAAGCAGGATCAACGAGAAAATGAAGGCATTGCAAAATCTAATTCCGAATTCAAACAAGACTGACAAGGCTTCAATGCTCGATGAAGCTATTGAATACCTCAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAACGGTTTGAGTTTGCATCCTATGTGCTTCAATGATGGCTTGCAGGCTCAGGCTCTTCAATTGTCTCACATGAGATCAGAGATCAATGAAGAAAACAGGTCTTTGCCTTTAAACATGACGACTACTCTGCCTTTACACCAAGAAAACCCCTTGCAATATGTATCCTATTCCAGTCTGCCTAACAAACGCAACGCACGAGACCAACTATTAGTGCCCTCTCCATCATATGTAATTAATCCAGAAACCTCTTTTGGGCCAGAATCCCCAATGCTAACGCAATTAAGACCCTCTCAATTTCAACCCAAAAGAACTTCCCAGATACGTAGGGATGACATATTGCCGCATCAGCAATTAAATGCAGACCATTCAGATACTAATCCTTTAGGTGATTCCCAAGTTTCACTCTCCTTTGATATGCAAAGATCAGAGCAGAAGGACGAGGGCTCCTTGGAAACACGCATTGCTGGAAGATCAGTGAGAGGTGATCCTGAGAAATAG 1224 0.4559 MGDMYNYGGTNTSIHNHNHNPCASSSSVLSSPSPQDEISLFLRQILLRSSSSSASSSSLITHTARNAHDFMSFTSMAGLCSSNAGLQNARPSDRSSLFRDEISAVDSSAGVSASNDAFLSSSGTYNSANMKGSSAVNVSLSSFGVSENEIDEYDCESEEGIEALVEEQPAKSAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCFNDGLQAQALQLSHMRSEINEENRSLPLNMTTTLPLHQENPLQYVSYSSLPNKRNARDQLLVPSPSYVINPETSFGPESPMLTQLRPSQFQPKRTSQIRRDDILPHQQLNADHSDTNPLGDSQVSLSFDMQRSEQKDEGSLETRIAGRSVRGDPEK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1485 407 MobiDBLite consensus disorder prediction 322 345 - -
Bisa11g1485 407 MobiDBLite consensus disorder prediction 359 407 - -
Bisa11g1485 407 Coils Coil 222 242 - -
Bisa11g1485 407 MobiDBLite consensus disorder prediction 382 407 - -
Bisa11g1485 407 MobiDBLite consensus disorder prediction 322 347 - -
Bisa11g1485 407 MobiDBLite consensus disorder prediction 360 381 - -
Bisa11g1485 407 Pfam Helix-loop-helix DNA-binding domain 187 233 IPR011598 GO:0046983
Bisa11g1485 407 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 29 364 IPR031066 -
Bisa11g1485 407 FunFam Basic helix-loop-helix transcription factor 178 241 - -
Bisa11g1485 407 MobiDBLite consensus disorder prediction 181 198 - -
Bisa11g1485 407 CDD bHLH_AtPIF_like 183 245 IPR047265 -
Bisa11g1485 407 MobiDBLite consensus disorder prediction 166 198 - -
Bisa11g1485 407 Gene3D - 178 242 IPR036638 GO:0046983
Bisa11g1485 407 SMART finulus 189 238 IPR011598 GO:0046983
Bisa11g1485 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Bisa11g1485 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1485 Bisa-ChrBisa11 34785666 34787987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1485 11 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 42.857 4.15e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g1485 HLH 4.8e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1485 11 34785666 34787987 Bisa11g1485 11 34785666 34787987 ECH