Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1480 ATGGTTCGAGTTATCTCAACGAGTAACATCCAAGCCTCAGCTCAAAGCGACGATTCAACTCGAAAGATCGAGTTAACTCCCTGGGATCTTCAACTCCTCCTCGTAGATTCGATTCAAAAAGGTCTTCTTTTCTATAACCCCAAGTCAAACAAAGGCAAAATAATTCAACAACTCAAAGCCTCCCTTTCTTCCACTCTAGACTTCTTCCCACCCCTCGCCGGCCGTCTCGCCGTCGTCGAAGACGGCGACGACACCACCACGTCCTCCGTTTTCATTCTATGCAACAACTCCGGCGCACTATTCGTCCACGCCGTGGCAGATAACGTGACGGTGGACGACATCCTTCGACCTACCTACACTCCTCGCATAGTCCACTCCTTCTTTGCACTTAACAGAGTCAGAAACTACGAAGGCACGCGCAAGCCACTCCTCGCCGTTCAAGTCACCGAGCTAGTAGATGGCGTCTTCATTGGCTGCACCATCAACCACACCGTTGCCGACGGCACGTCATTTTGGCACTTCTTCAATTCATGGTCTGAAATCTCTCGTTCGAGCAAGTTATCCAGTTCCAAGCTACCGTTGCTCGAACGTTGGTTTCCCGACGGTGTTGACCGCCCCGTACGCATTCCTTTCGCGAAGCAGACCCAAAAACTCGATGGTTATGTTGATTCAAAGCTGCAGCTAGAGAGGGTGTTTCGTTTCACAAAGGAGAAAATTGCGGAACTAAAAGCCAAAGCCAATGCGATGGCTAGTAATTCGACTAAAATATCTTCTCTTCAAGCAGTTTTAACGCATCTTTGGCGGTCTATAATTCGAAACCAAGGTCTTGACCAAGAGGAAGTGGTGAACTATAGATTACTGGTGGGCATAAGACCGAGGCTGCGTCCACCGTTGCCAGAGTGTTATTTTGGAAACGCGGTGCAGGATGGTACTGTGAGCATGAAAGCAAGGGAACTACTAGAGCCGGAGGGGCTAGGAAAGGCTGCTTTGGAGATGAACAGGATGGTGGCTTTACACACGGAAGAGACGTTCATGAACTACTTGAAGTGTTGGGTGAAAAGGCCGAGGCTGCTTACGGAGGGTGGGATGGCCGGGAATGCTTTGGTTACGAGCAGCTCGCCGAGGTTCGATGTGTATGGGAATGACTTCGGGTGGGGGAAGCCGGTGGCTGTTCGGAGCGGCGCTGGGAATAAAACTCACGGCAAGGTTACGGTGTTCGCTGGAGGAGAGGAAGGTATCATTGACGTGGAAGTTTGCCTTTCTTACCAGATATTGGAGGCCATGGGAAAAGACTCAGAGTTCATGTATGCTGTCTCTGTTACATCATATGACTGA 1335 0.5011 MVRVISTSNIQASAQSDDSTRKIELTPWDLQLLLVDSIQKGLLFYNPKSNKGKIIQQLKASLSSTLDFFPPLAGRLAVVEDGDDTTTSSVFILCNNSGALFVHAVADNVTVDDILRPTYTPRIVHSFFALNRVRNYEGTRKPLLAVQVTELVDGVFIGCTINHTVADGTSFWHFFNSWSEISRSSKLSSSKLPLLERWFPDGVDRPVRIPFAKQTQKLDGYVDSKLQLERVFRFTKEKIAELKAKANAMASNSTKISSLQAVLTHLWRSIIRNQGLDQEEVVNYRLLVGIRPRLRPPLPECYFGNAVQDGTVSMKARELLEPEGLGKAALEMNRMVALHTEETFMNYLKCWVKRPRLLTEGGMAGNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKTHGKVTVFAGGEEGIIDVEVCLSYQILEAMGKDSEFMYAVSVTSYD 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1480 444 Gene3D - 1 213 IPR023213 -
Bisa11g1480 444 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 435 - -
Bisa11g1480 444 Pfam Transferase family 1 435 - -
Bisa11g1480 444 Coils Coil 225 245 - -
Bisa11g1480 444 Gene3D - 225 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1480 Bisa-ChrBisa11 34665672 34667006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1480 44 395 Monolignol Biosynthesis Gene Families AT5G48930 28.989 6.19e-28 113