Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1470 ATGTGGGATCTGAATGACTCGCCGGATCGGAGGAAGGACGACGAATCCGAAGGCTGCTCCTCGCTCAAGAATTCCATGGACGGGGACGACGAGAAGGGGAAGCGGGTCGGATCTGTGTCTAATTCGAGCTCCTCCGCTGTGGTCATCGAGGACGGATCGGAGGACGACGAGGGGGAGAGGAGCAGAACAGTGAAGAAGCGAAGCAACAAGATATTCGGGTTCTGCGTGACCCAGGACCACGAGTCCATGGATAGCGACCCGCCCGTGACACGGAAGTTTTTCCCGGTGGAGGAGGAGGAGGAGGAGGGAGAGGTGGCGGCGGCGTCATCCGTCGGCGGAGTAGGGTCGACGTTCCCCCGGGCCCACTGGGTGGGGGTGAAATTCTGCCAGCCGGAAGCCGCCGGAGGAGGAAGATCAGTGGAAGTGTCGTCGCAGCCGATGAAGAAGAGCCGGCGAGGACCGAGGTCGAGAAGCTCTCAGTATAGAGGAGTCACCTTCTACAGAAGAACTGGTCGATGGGAGTCACACATATGGGATTGTGGAAAGCAAGTGTATCTGGGAGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTTCGGGGAGTCGAGGCTGACATCAACTTCAACATAGAAGACTATGAAGAAGACTTGAAGCAGATGAGTAATCTGACCAAGGAGGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGGTTTCCAAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGGAGATGGGAGGCTCGAATGGGCCAATTTTTAGGCAAAAAATACGTTTATCTGGGCTTGTTCGACACCGAGATTGAAGCTGCAAGGGCCTATGACAAGGCAGCGATAAAATGCAATGGCAAAGAGGCCGTCACCAACTTCGACCCCAGCATATACGAGAATGAGCTTAATTCTGAGTCGTCAGGTAACGCACCAGATCACAATCTGGATTTAAGTTTGGGGAATTCAAGCTCAAAACACGGCAATAGACAAGTTCCTGGGAATGATCATAGTCATACGCCGAATACTGCAATTGATCATAATGAATCTAATTGGAGGAACAACGGGGGATTCAGGCCCAAGCTCGCTCTGCTACCAGAACAATGTAATAGAATTAGTAACGTGGAAAGCCAGAGTGAAGGCCTGAGGCTGTTGAGTCAAAGTCAGGTTCAGTCTCATTCTCAGTCACAATCTCCAGCCTCTAAAGAAATGCAAAGATATGGTGCCTACAGAACACCTGGAGAGCCTCACATGCTTCACAATTTTGCGCCTTCACATCTTCACCCACCAAGTTTCCATTTTGCGGGCAGCAGCAATGGAGGAGGAGGGCGAATAGGAAGCGATCTTTCACTGTCAATGAGCGATCAGATTCAGATTCAGATTCAGCCTCAATCTCAATCTCATTACATAGCAAGTGCTGCAGCATCATCAGGATTCCCACCGCAGATTAGACCTTCCCAAGGTTGGCTGCAGAAAAATGGGTTCCACACCCTCATGAGACCCTCCTGA 1551 0.5132 MWDLNDSPDRRKDDESEGCSSLKNSMDGDDEKGKRVGSVSNSSSSAVVIEDGSEDDEGERSRTVKKRSNKIFGFCVTQDHESMDSDPPVTRKFFPVEEEEEEGEVAAASSVGGVGSTFPRAHWVGVKFCQPEAAGGGRSVEVSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESSGNAPDHNLDLSLGNSSSKHGNRQVPGNDHSHTPNTAIDHNESNWRNNGGFRPKLALLPEQCNRISNVESQSEGLRLLSQSQVQSHSQSQSPASKEMQRYGAYRTPGEPHMLHNFAPSHLHPPSFHFAGSSNGGGGRIGSDLSLSMSDQIQIQIQPQSQSHYIASAAASSGFPPQIRPSQGWLQKNGFHTLMRPS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1470 516 ProSiteProfiles AP2/ERF domain profile. 252 309 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 MobiDBLite consensus disorder prediction 134 160 - -
Bisa11g1470 516 MobiDBLite consensus disorder prediction 1 64 - -
Bisa11g1470 516 MobiDBLite consensus disorder prediction 316 367 - -
Bisa11g1470 516 FunFam AP2-like ethylene-responsive transcription factor 159 218 - -
Bisa11g1470 516 Pfam AP2 domain 160 208 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 Pfam AP2 domain 251 300 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 SUPERFAMILY DNA-binding domain 159 217 IPR016177 GO:0003677
Bisa11g1470 516 CDD AP2 251 311 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 SMART rav1_2 252 315 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 SMART rav1_2 160 222 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 MobiDBLite consensus disorder prediction 1 36 - -
Bisa11g1470 516 SUPERFAMILY DNA-binding domain 251 311 IPR016177 GO:0003677
Bisa11g1470 516 FunFam AP2-like ethylene-responsive transcription factor 251 311 - -
Bisa11g1470 516 CDD AP2 160 217 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 PRINTS Ethylene responsive element binding protein signature 291 311 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 PRINTS Ethylene responsive element binding protein signature 253 264 IPR001471 GO:0003700|GO:0006355
Bisa11g1470 516 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 84 406 - -
Bisa11g1470 516 Gene3D AP2/ERF domain 251 310 IPR036955 GO:0003700|GO:0006355
Bisa11g1470 516 Gene3D AP2/ERF domain 159 218 IPR036955 GO:0003700|GO:0006355
Bisa11g1470 516 ProSiteProfiles AP2/ERF domain profile. 160 216 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1470 Bisa-ChrBisa11 34566690 34569354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1470 1 341 AP2-EREBP Transcription Factor Family AT4G36920 69.382 2.60e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa11g1470 AP2 3.6e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1470 11 34566690 34569354 Bisa01g2005 01 35360921 35363251 CCT
Bisa11g1470 11 34566690 34569354 Bisa11g1470 11 34566690 34569354 ECH