Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1453 ATGACGACGGGCTACAGGAGCGATAATTTCGCGGCCAAATTGGAGGATAATGCTGTCCAAGAAGCCGCCTCTGGGTTGGAGAGCGTCGAGAAGCTCATCAGGTTGCTTTCTCACAGCCAGCAACAGTACCAGTCGTCTTCTTCGACTGCGAAATCATCCATCGACATCGAGATGGACTGTAGAGCTGTCGCCGACGTCGCGGTTTCTAAGTTCAAGAAGGTGATTTCTCTTCTGGGGCGAACCAGAACAGGGCACGCTCGATTCAGAAGAGCCCCTTTGGCTCCTCCTCCTGCCGTTAGCCAGAACCCGGACCCACAGCAACCTTCCGAACCCAAAATTTTTTATGCGACGCCGTTGCAGCAGATCCCTTCGGCGCTTATTCAGCACCAAGCTCAAAGCGAACAACACCCTTTGATCCCCAAAAATGGGGTGGTTGAGAGGAAGGATTCCTTCAAGACCATCAATTTCTCGTATTCCTCCGCCGCGAATTCGTTCATGTCGTCGCTCACCGGAGAGACTGATAGTAAACAACCTTCCTCCTCGTCGCCGGCGACGGCTTTTCAGATCACCAATCTGTCTCAGGTCTCGTCAGCAGGAAAGCCTCCGCTTTCTTCGTCTTCGTTGAAGAGAAAGTGCAGCTCAGAGAACTTGGGTTCCGGCAAGTGTGGAAGTTCCTCTGGTCGCTGCCATTGCTCTAAAAAGAGAAAAATGAGATTGAAAAGGGTAGTGAGGGTGCCTGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCTTGGAGAAAGTATGGACAGAAACCCATTAAAGGATCTCCTCATCCAAGAGGATACTACAAGTGTAGCAGCGTGAGAGGTTGTCCAGCTCGCAAACATGTAGAACGAGCTCTAGATGATCCAGCTATGTTAGTAGTAACATATGAAGGTGATCACAATCACTCGCTCTCTGCGACTGATTCTACGAATCTCATCCTAGAATCTTCTTAG 990 0.497 MTTGYRSDNFAAKLEDNAVQEAASGLESVEKLIRLLSHSQQQYQSSSSTAKSSIDIEMDCRAVADVAVSKFKKVISLLGRTRTGHARFRRAPLAPPPAVSQNPDPQQPSEPKIFYATPLQQIPSALIQHQAQSEQHPLIPKNGVVERKDSFKTINFSYSSAANSFMSSLTGETDSKQPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSGRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGDHNHSLSATDSTNLILESS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1453 329 Gene3D WRKY domain 242 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa11g1453 329 ProSiteProfiles WRKY domain profile. 251 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa11g1453 329 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa11g1453 329 MobiDBLite consensus disorder prediction 192 224 - -
Bisa11g1453 329 FunFam WRKY transcription factor 65 240 317 - -
Bisa11g1453 329 SUPERFAMILY WRKY DNA-binding domain 253 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa11g1453 329 Pfam WRKY DNA -binding domain 258 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa11g1453 329 MobiDBLite consensus disorder prediction 87 111 - -
Bisa11g1453 329 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 321 IPR044810 GO:0003700
Bisa11g1453 329 Pfam Plant zinc cluster domain 209 254 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1453 Bisa-ChrBisa11 34306110 34307428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1453 13 314 WRKY Transcription Factor Family AT2G24570 46.273 1.21e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa11g1453 WRKY 9.7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2015 01 35503782 35504902 Bisa11g1453 11 34306110 34307428 CCT
Bisa11g1453 11 34306110 34307428 Bisa11g1453 11 34306110 34307428 ECH