Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1448 ATGCTTGCCATTGGAATTAATGAGAACAAAGGGGTTCATTATGGAGAAGCCAAAGTTGCATCTACCCGAACTAAAGGGAGGAGAGTAGGTAGAGTATTTATGGTTCCAATTCCATCCGATTCTTTCTTTGTTTTAAAGGCCAGAGTCGTCATTTACATTTATGAGCGCAGAAGCATAGGACATGGGACGGACGAGGAATGGTGTTGTGTACTGTACACCCTTTTGGAGCTCTCTACGTTTGCCAAATGGCCAATGCCATACCCTTTCCTTTCACATTGGAGGATTTCTTTCTTATCTTCTTTGACGGAGATGGCTCTCAGGGAAGAAGCCCATGATTTGCAAGACTCTTCGTTGTTCCTTGATGCGCTCCTCTGTGAGGAGGACGGTTTTGAGGAAGATTCCGCCGAGTGTAATAAGAAGGGGGAGAGTGATAACTACGATTCAACGGTTAGAAATCCCTCGTCTCTGCCTTTGATTTTGTTCGACAATGACTTGTTATGGGAAGACGATGAGCTCGTCTCTCTAATCTCAAAAGAGGGAGAAACTCATTTTAGTTCAAATCAGAATCTAATTGCCGATAGGCCCCTAGAGCCAGCTCGCGAGGAGGCTGTGCGCTGGATTTCTAAAGTTTGTGCGCACCATGGTTTCTGTGCTTTGACCACTGTTCTTGCTGTGAACTACTTCGATAGGTTCATCACAAGCCTGAGGTTTCAGAAGGATAAGCCATGGATGACTCAGCTCACTGCAGTTGCGTGTTTATCTCTGGCTGCCAAAGTGGAGGAGACTCAAGTCCCGCTTCTTTTAGACCTGCAAGTGGAGGAGTCGAAGTACGTGTTTGAAGCAAAGACTATACAGAGGATGGAGCTTCTGGTGTTATCCACTCTTAAATGGAGGATGAATCCGGTGACCCCAATCTCCTTCTTTGACCACATTGTCAGAAGGCTGGGTTTAAAGAGCCGCCTGCATTGGGATTTCCTGTTTCGGTGCGAGCGTGTTCTTCTCTCTGTCATTCTGGATTCAAGGATTATGAGTTACCTTCCTTCTGTACTAGCTGTTGCTGCAATGATCCATGTTATTAGTGAGATAGAACCACTTAATGCAATGAAACACAGAAATCAGCTCATGGGTTTACTCAAAATCAGTGAGGAACAAGTGAACGACTGCTACAAACTCGTTCTGAAACTGCTATGTTGCCAGGAAGACATCCAAAATGTTAACCAGAAACGCAAGCGCCTGTCTAGCCCAGATGGTATCATTGATGCATCTTTCAGCTGTGATAGCTCAAATGACTCGTGGGCCAACACATCACCAGTCTCTTTTTCATTAGAGCCAATTTTCAAACGGAGTAGAGCTCTGGAGCAGCGGATGCAGTTGCCTTCCATAAATCGTGTGTCTATTGATGTTCTTCACAGCCCTCGTTAG 1422 0.4536 MLAIGINENKGVHYGEAKVASTRTKGRRVGRVFMVPIPSDSFFVLKARVVIYIYERRSIGHGTDEEWCCVLYTLLELSTFAKWPMPYPFLSHWRISFLSSLTEMALREEAHDLQDSSLFLDALLCEEDGFEEDSAECNKKGESDNYDSTVRNPSSLPLILFDNDLLWEDDELVSLISKEGETHFSSNQNLIADRPLEPAREEAVRWISKVCAHHGFCALTTVLAVNYFDRFITSLRFQKDKPWMTQLTAVACLSLAAKVEETQVPLLLDLQVEESKYVFEAKTIQRMELLVLSTLKWRMNPVTPISFFDHIVRRLGLKSRLHWDFLFRCERVLLSVILDSRIMSYLPSVLAVAAMIHVISEIEPLNAMKHRNQLMGLLKISEEQVNDCYKLVLKLLCCQEDIQNVNQKRKRLSSPDGIIDASFSCDSSNDSWANTSPVSFSLEPIFKRSRALEQRMQLPSINRVSIDVLHSPR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1448 473 Pfam Cyclin, N-terminal domain 179 300 IPR006671 -
Bisa11g1448 473 Pfam Cyclin, C-terminal domain 302 414 IPR004367 -
Bisa11g1448 473 SUPERFAMILY Cyclin-like 303 403 IPR036915 -
Bisa11g1448 473 PANTHER CYCLINS 174 403 IPR039361 -
Bisa11g1448 473 FunFam D3-type cyclin 193 300 - -
Bisa11g1448 473 FunFam CYCLIN D32 301 390 - -
Bisa11g1448 473 SMART Cyclin_C_2 302 427 IPR004367 -
Bisa11g1448 473 Gene3D - 301 390 - -
Bisa11g1448 473 SUPERFAMILY Cyclin-like 166 300 IPR036915 -
Bisa11g1448 473 CDD CYCLIN_AtCycD-like_rpt2 302 392 - -
Bisa11g1448 473 SMART cyclin_7 205 293 IPR013763 -
Bisa11g1448 473 Gene3D - 197 300 - -
Bisa11g1448 473 CDD CYCLIN_AtCycD-like_rpt1 199 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1448 Bisa-ChrBisa11 34255178 34259231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1448 104 463 Core Cell Cycle Gene Families AT5G67260 50.543 2.29e-109 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2026 01 35706741 35708083 Bisa11g1448 11 34255178 34259231 CCT
Bisa11g1448 11 34255178 34259231 Bisa01g2026 01 35706741 35708083 ECH
Bisa05g0206 05 3147119 3148508 Bisa11g1448 11 34255178 34259231 ECH
Bisa11g1448 11 34255178 34259231 Bisa11g1448 11 34255178 34259231 ECH