Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1442 ATGAATACAGCTGTAAACAGGAAGGATATGGATCGGATCAAGGGCCCTTGGAGCCCCGAGGAAGACGAGGCGTTACAGAAGCTCGTGGAGAAGCATGGACCAAGGAATTGGTCTCTGATTAGCAAGTCCATTCCTGGCCGCTCCGGCAAGTCTTGCAGGCTTCGCTGGTGTAATCAGCTCTCTCCTCAAGTCGAGCACCGAGCGTTCACGTCTGAAGAGGATGAGACCATCATCAGAGCTCACGCCCGGTTCGGCAACAAATGGGCCACGATCGCTCGCCTACTCTCTGGCCGAACCGACAACGCCATCAAGAATCACTGGAACTCCACCTTGAAGCGCAAGTGTGCTTCCATGATGATCGATGACGGCGGTGCTGTTGGTGGATTCGACGGTAGTTTTAGCCCGCAGCCGCTGAAGAGGTCGGTGAGTGCCGGTGCTGCGGTGCCCGTGTCCACCGGGCTCTACATGAATCCGTCTTCCCCGGGTAGCCCGTCCGGTTCAGATGTAAGCGAAACGAGTGTTCCCTTCCCGTCGTCTTCTCACGTATACCGACCTGTGCCGAGAACCGGCGGAGTTCTACCTCCCGTAGAAACGACGTCGTCTTCCAATGACCCTCCGACATCATTGTCCCTGTCTCTTCCGGGCGTAGATTCATCTGAAGTCTCGAATCGGCCTACAGAGCCGACACAGACAGCCCCAGTGACTAATACTATGCCTTTGTTATCTGTAATGGCGCCGGCGCCGGCGCCGCCTCCAGCTCCAGTTCCATCGCCGGCTTCGATGTCGGTGCAGCAGCAGGTTCATTTGGGTAGGGATGATCGGAGCAGCGAGGGAGGTCCATCGGCTGCGAATCAGACTGGATTCTTGGGATTCAATTTCAGTGCAGAGTTGGTGGCTGTGATGCAGGATATGATAAGGAGAGAGGTGAGAAGTTATATGACGGGATTGGAGCAGCAGAATGGGATGTGCTTTCAGGCAGCTGATGGATTTAGGAACGCTTCGGTGAAGCGTATCGGGATTAGCAGGGTCGATTCTTGA 1038 0.5549 MNTAVNRKDMDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTSEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDDGGAVGGFDGSFSPQPLKRSVSAGAAVPVSTGLYMNPSSPGSPSGSDVSETSVPFPSSSHVYRPVPRTGGVLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRPTEPTQTAPVTNTMPLLSVMAPAPAPPPAPVPSPASMSVQQQVHLGRDDRSSEGGPSAANQTGFLGFNFSAELVAVMQDMIRREVRSYMTGLEQQNGMCFQAADGFRNASVKRIGISRVDS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1442 345 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Bisa11g1442 345 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Bisa11g1442 345 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Bisa11g1442 345 Gene3D - 13 65 - -
Bisa11g1442 345 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Bisa11g1442 345 MobiDBLite consensus disorder prediction 155 179 - -
Bisa11g1442 345 SMART sant 65 113 IPR001005 -
Bisa11g1442 345 SMART sant 13 62 IPR001005 -
Bisa11g1442 345 MobiDBLite consensus disorder prediction 194 238 - -
Bisa11g1442 345 CDD SANT 68 111 IPR001005 -
Bisa11g1442 345 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa11g1442 345 FunFam Transcription factor MYB44 68 114 - -
Bisa11g1442 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Bisa11g1442 345 FunFam MYB transcription factor 14 65 - -
Bisa11g1442 345 MobiDBLite consensus disorder prediction 155 283 - -
Bisa11g1442 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Bisa11g1442 345 MobiDBLite consensus disorder prediction 244 258 - -
Bisa11g1442 345 Gene3D - 67 122 - -
Bisa11g1442 345 PANTHER MYB PROTEIN-RELATED 14 218 - -
Bisa11g1442 345 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1442 Bisa-ChrBisa11 34177889 34178926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1442 7 344 MYB Transcription Factor Family AT4G37260 51.404 5.66e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g1442 Myb_DNA-binding 1.2e-17 CL0123