Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1403 ATGGACTATAGCTATAGGGCTTCTCATTCAGCTTTTGGCCGCGTGGCTAAGAGTGGTGACTGTGAGGCACGAGCTGAACTATGCAGAGAGGAGCACCCAACGTGGGCGAGGAATGTTTTGTGGACGATGGAGGAGCTGGCCTTATTGGCTCTGATATTCAAGAGTTTTATTTTTCTATTTCTTGAGAACTATGGTGACGAGAAATTGGAAGCATTTTTTCCTGTTCTCATTGGTTTAATGGCTCTCTCGTTTGCTTGGATGTTTGGTGAAACAAAGCCAAGCGACAAAGATCTTCTTCTTGGTATTTTGGTTCCGAAACTTAGCTCTAGAATAATACAGCAGGCTATTGGAGTTGTAGGCTGCAATATTATGCCTCACAATCGGTTTCTGATATGGACACAGACTATTGCATGGCTTGTGGCTGCTTTGGTGATTGTGATCAATGGCTATCTTATGTTAGAATTCTTCATGTCTGAAGTCAATGGAGCAGCATTTAGCGCTTTCGTGATTGCATTTACAGCTGCAAGGCAATGGCACCTTATTGTTTGACCTGGAACTTCCAGTCCCTTCACAAGTCACCTGGAAACAGAGCACCTCTACACCCTCTTTAGCTCAAACAGTGGTGGGAATGTAGAGATCCATGATGCTCTTTGTATAACACTTACAATGCCTCCAGCGTCTCTTTTCCATTCTCAGTTATCGATTTATTCACTCGAACTGTACGGGGCTGCGAATGCGACCACCCCTGGACTGCTGGAGCAAACTCTTCGCCTGATATCAGGATCAGCCACTCCGAACCCAGTTTTAGAGATATGTTGGGTCGAAGGCACCCCACTGTGCATCAAAGCACTGGCGAATTTTGCTTTCGTCCTTACGTTTCCTTCCATCCTTTTTCACAAACGGAATGTGGTAGTTCCTCCATCGTCTTCACCGGTACCCTCTTCTCTGTCTTGTTTCGATCTGTTCCATCTTGCGGAGCTCAATTCGGATTCGGAGGCTAACATAAGCTGGCAACTCATGGCGCAAGAATCAGCTCAGCGAATTATGACCATCTCCCTAATCCTATGCCTAGCGCAATTAAGTCCTTGGATTGTGCTCGGCGTCTCTGGTGATCTCAGCCACATTTTGCTCTCTAGAAATCTCCGCGAAGACGCTGGCTCTTCCATGATATTGCCGCTCTATCTCTCTGCTTCCAATTCTTCCGTTTCCGACTTCGATTCCCGTCGCCAACTCCAGAAATCCGAGGCCGAACACCACCCTAACGCTCGCATGGGGCTCCATGACGATCTTCTCCTTAACGGGTACTATACTACGCGGCTTTGGATCGGGACTCCTCCGCAGATGTTTGCACTTATTGTTGATACGGGAAGTACTGTAACGTATGTCCCGTGCTCTACCTGCGAACAGTGTGGGACGCACCAGGACCCGAAGTTCCAGCCAGAATTGTCAAGCACCTATCAACCTGTCAGATGCAAGATAGATTGCAACTGTGACACTGACAAGAATCAGTGCACGTATGAGAGACAGTACGCTGAAATGAGTACTAGCAGCGGTGTCCTTGGCACTGATGCCATATCCTTTGGAAATCAAAGTGAGCTTGACCCTCAACGTGCTGTTTTTGGCTGTGAAAATGTTGAGACTGGTGATCTTTATAGTCAGCATGCTGATGGCATCATGGGTTTGGGCCGTGGCGATCTCAGTATTGTGGATCAGCTGGTTAATAAAAAGATAATAAGTGATTCCTTCTCACTGTGCTATGGTGGAATGGATTTTGGCGGGGGTGCTATGGTTCTTGGTGGAATATCTCCCCCATCAGACATGGTCTTTGCACATTCAGATCCTGTGCGAAGGTGTTTTCGGGATGGCAACAGTCCATATTACAATATAGATTTGAAGGAAATGCGTGTTGCGGGGAAACAACTGCCTCTAAACCCTAAGGTTTTCGATGGAAAACATGGAACTGTGTTGGATAGTGGTACAACTTATGCATACCTTCCTGAAGCAGCATTTTCCGCATTTGAAGATGCTATTAAGAAGGAACTTCAGTCTTTCAAGCAAATACCAGGCCCAGATCCAAATTATAATGATATATGTTTTGCTGGTGCTGGAAATGCTGTCTCTGAACTGTCCAAAAGCTTTCCAACAGTTGACATGGTATTTGGAAATGGTCAGAAGATGTCTCTGTCACCTGAAAACTACTTGTTTCGGCATTCAAAAGTGCAAGGTGCATATTGTCTTGGGATTTTCCAAAATGGAAAGGATCCAACTACTCTTCTAGGAGGTATCGTAGTCCGAAACACTCTTGTGACATATGATCGTCAGAATTCGAAGGTTGGTTTCTGGAAAACTAATTGTTCTGAATTATGGGAAAGACTACAGTTATCTGCCTCCCATCCACCAGAGTCTCCAATTTCAGGAGTAAATGCAACTGAAGCATTCGAACCTTCAGTTGCTCCATCTGCATTACAACATGATTTGCGTCCAGAGGAACTTCAAATTGCCCAAATAACAATTGTAATTTCGTTTAACATCAGCTACCTGGATATGAAGGGTCACATTACAGAACTAGCTGGACTCATTGCTGATGAGTTAGATGTTAAAACTTCACAGGTTCACTTATTGAATTTTACTTCGCTTGGAAATGGTTCCCTCTCGAGATGGGCCATAACCCCAGATACATCTGGTGATTACATATCTAATACAACTGCAATGAGTATAATTTCCCGCCTTGAAGAGCACCGCATCCAACTTCCTAACACCTATGGAAGTTATAAGTTGGTAGGTTGGGATGTTGAGTCTCCATCAAAACGGACTTGGTGGCAGCAAAATCATATGGTGGTAGCTGTGTCTGTTTTAGTTACGTTGCTTCTTGGATTATTGGCCATTGGAATATTCGTAATGGTGAAGAACAGACAGCATCAAGCCGTGCATCCATATAAGCCTGTTAGTGTCTCTGTTCCAGAACAGGAACTTCAACCACTGTGA 2985 0.4489 MDYSYRASHSAFGRVAKSGDCEARAELCREEHPTWARNVLWTMEELALLALIFKSFIFLFLENYGDEKLEAFFPVLIGLMALSFAWMFGETKPSDKDLLLGILVPKLSSRIIQQAIGVVGCNIMPHNRFLIWTQTIAWLVAALVIVINGYLMLEFFMSEVNGAAFSAFVIAFTAARQWHLIVXPGTSSPFTSHLETEHLYTLFSSNSGGNVEIHDALCITLTMPPASLFHSQLSIYSLELYGAANATTPGLLEQTLRLISGSATPNPVLEICWVEGTPLCIKALANFAFVLTFPSILFHKRNVVVPPSSSPVPSSLSCFDLFHLAELNSDSEANISWQLMAQESAQRIMTISLILCLAQLSPWIVLGVSGDLSHILLSRNLREDAGSSMILPLYLSASNSSVSDFDSRRQLQKSEAEHHPNARMGLHDDLLLNGYYTTRLWIGTPPQMFALIVDTGSTVTYVPCSTCEQCGTHQDPKFQPELSSTYQPVRCKIDCNCDTDKNQCTYERQYAEMSTSSGVLGTDAISFGNQSELDPQRAVFGCENVETGDLYSQHADGIMGLGRGDLSIVDQLVNKKIISDSFSLCYGGMDFGGGAMVLGGISPPSDMVFAHSDPVRRCFRDGNSPYYNIDLKEMRVAGKQLPLNPKVFDGKHGTVLDSGTTYAYLPEAAFSAFEDAIKKELQSFKQIPGPDPNYNDICFAGAGNAVSELSKSFPTVDMVFGNGQKMSLSPENYLFRHSKVQGAYCLGIFQNGKDPTTLLGGIVVRNTLVTYDRQNSKVGFWKTNCSELWERLQLSASHPPESPISGVNATEAFEPSVAPSALQHDLRPEELQIAQITIVISFNISYLDMKGHITELAGLIADELDVKTSQVHLLNFTSLGNGSLSRWAITPDTSGDYISNTTAMSIISRLEEHRIQLPNTYGSYKLVGWDVESPSKRTWWQQNHMVVAVSVLVTLLLGLLAIGIFVMVKNRQHQAVHPYKPVSVSVPEQELQPL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1403 994 CDD pepsin_A_like_plant 435 785 IPR034161 -
Bisa11g1403 994 FunFam Eukaryotic aspartyl protease family protein 607 789 - -
Bisa11g1403 994 Coils Coil 994 994 - -
Bisa11g1403 994 Gene3D Acid Proteases 411 599 IPR021109 -
Bisa11g1403 994 FunFam Aspartyl protease family protein 420 599 - -
Bisa11g1403 994 Pfam Natural resistance-associated macrophage protein 49 131 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa11g1403 994 ProSiteProfiles Peptidase family A1 domain profile. 436 781 IPR033121 -
Bisa11g1403 994 Pfam Xylanase inhibitor C-terminal 627 780 IPR032799 -
Bisa11g1403 994 Gene3D Acid Proteases 617 789 IPR021109 -
Bisa11g1403 994 PRINTS Natural resistance-associated macrophage protein signature 66 87 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa11g1403 994 PRINTS Natural resistance-associated macrophage protein signature 115 138 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa11g1403 994 PANTHER ASPARTYL PROTEASES 387 779 IPR001461 GO:0004190|GO:0006508
Bisa11g1403 994 SUPERFAMILY Acid proteases 432 790 IPR021109 -
Bisa11g1403 994 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 451 462 IPR001969 GO:0004190|GO:0006508
Bisa11g1403 994 Pfam Xylanase inhibitor N-terminal 436 600 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1403 Bisa-ChrBisa11 33493527 33508060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1403 16 130 Inorganic Solute Cotransporters AT5G67330 54.110 5.24e-38 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1403 11 33493527 33508060 Bisa01g2057 01 36370301 36372897 CCT
Bisa11g1403 11 33493527 33508060 Bisa11g1403 11 33493527 33508060 ECH