Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1380 ATGACGCAATTCACACCTCGTTTCCCTCCTCTGCACCAAATCGCCCCTCCCTTTTCCACCATGAACAAAAATAATCAAATTCCCAGAACTCGACCCTGGTCTGGATTCCCCACCTCCAAGGCATTTAACACATTCGCCGACGCTAACTGCATGGAACAATTACTCGTTCACTGTGCAAACTCCATTGAGTCCAACGACGTCACTCTAGCCCAGCAAATCCTCTGGGTTTTGAACAACATCGCTCCCCCCGACGGCGATTCCAACCAACGCCTCGCCTCCGCCTTCAACCGCGCCCTAGCCGCCCGAGCTGCCAAATCCGGCAGCTACAAAATGCTCGCCGCAGTCGCCGACGCCCACACCAACCTCGCCGCCATCAACACCCACACCTTCTCCGTCATCGAGCTCGCCAACTTCGTGGACTTGACTCCCTGGCACCGCTTCGGCTTCACGGCGGCCAACTCTGCCATTCTCGAAGTCACCGAAGGATACTCCGTCATTCACATCGTCGACCTAAGCTCCACGCATTGCATGCAGATTCCCACCCTCATCGACGCCATCGCAAGCCGCCACGAGGTCCCTCCCCTGATCAAGGTCACAGTCGCCGCTTCCACCAACGACATCCCCCCAAAGCTCGACCTCTCCTACGACGAATTGGGAGCAAAATTGGTCAATTTCGCACTCTCCAAAAACGTAATAATGGAATTCAAAGCAATTTCTTCGACTTACAAAGACGGATTCGCGGCCCTAATCGAACAGCTTCGGGTGCAACAAATGCTTTTCGCGGCAGAAGGACAAAGGAGGGAAGCTCTGATTATAAACTGCCACATGATGCTCCATTACATCCCCGACGAAACCCTATCCCCAATTAACCCAGAATCAGATCATCCAATCTCATCCTCTTACATGTACGACTCCTCGACGACGTCGTTGCGGTCGATGTTCCTGAAAGCTCTGCGTAGCCTAGACCCGACGATTGTAATTTTAGTGGAGGAGGACGCGGATTTGACGTCGAGCGACCTGGTGAGCAGGGTGAGGGCGGCGTTTAACTACCTGTGGATACCGTACGACACGGTGGACACGTTCTTGGCGAGAGGGAGTGAACAGAGGCAGTGGTACGAAGCGGACATAGGGTGGAAGATAGAGAACGTGATAGCGCAGGAGGGGGTGCAGAGGGTGGAGAGGGTTGAGCCCAAGAGCAGGTGGGAGCATCGAATGAGGAACGCGAGGTTTCAGGGTGTGGGGCTGAGCGAGGACGGCGTTTCGGAGGTGAAAGCCATGCTGGACGAGCATGCTGCTGGCTGGGGGTTGAAGAGGGAGGAGGAGCATATTGTGCTTACCTGGAAGGGCCACAACGTTGTTTTTGCCTCTGCCTGGTTGCCTGCTTGA 1386 0.5498 MTQFTPRFPPLHQIAPPFSTMNKNNQIPRTRPWSGFPTSKAFNTFADANCMEQLLVHCANSIESNDVTLAQQILWVLNNIAPPDGDSNQRLASAFNRALAARAAKSGSYKMLAAVADAHTNLAAINTHTFSVIELANFVDLTPWHRFGFTAANSAILEVTEGYSVIHIVDLSSTHCMQIPTLIDAIASRHEVPPLIKVTVAASTNDIPPKLDLSYDELGAKLVNFALSKNVIMEFKAISSTYKDGFAALIEQLRVQQMLFAAEGQRREALIINCHMMLHYIPDETLSPINPESDHPISSSYMYDSSTTSLRSMFLKALRSLDPTIVILVEEDADLTSSDLVSRVRAAFNYLWIPYDTVDTFLARGSEQRQWYEADIGWKIENVIAQEGVQRVERVEPKSRWEHRMRNARFQGVGLSEDGVSEVKAMLDEHAAGWGLKREEEHIVLTWKGHNVVFASAWLPA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1380 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 448 IPR005202 -
Bisa11g1380 461 Pfam GRAS domain family 51 458 IPR005202 -
Bisa11g1380 461 ProSiteProfiles GRAS family profile. 42 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1380 Bisa-ChrBisa11 33244007 33245392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1380 36 460 GRAS Transcription Factor Family AT3G49950 57.809 1.72e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa11g1380 GRAS 3.9e-91 CL0063