Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1378 ATGAGTTGCAACGGCTGCCGAGTTCTTCGAAAAGGTTGCAGCGAGTCCTGTATTTTGAGGCCTTGCTTGCAGTGGATCGACACCCCCGAAGCCCAAGGCCATGCCACTGTCTTCGTAGCCAAGTTCTTTGGCCGCGCTGGCCTCATGTCCTTCATTTCCAACGTCCCTGAAAGTCAGAGACCTGCTCTGTTTCAGTCTTTGTTGTTTGAAGCGTGCGGACGAACCGTGAACCCGGTGAACGGCGCGGTGGGGCTTTTATGGACGGGAAACTGGCACGTGTGTCAGGCCGCAGTCGAGACGGTGCTGCGAGGCGGCACGTTGAGGTCCATTCCTGAGCTTATCGGGTCGGATGCTCCGACTCTTGCCACCGATGAGGCGTCCGAGGCGGAAGTGACGTGCACCGACATGTGGAGCATCAGAGATCGCAATCCGACTTCGCGGTTCACAAATTCGCGATCTAACAAGTTCTCTTCCTGCAAGCGCAAGCGATTGGAGGAATCCAGCAAGCCTTATACGACCGATCTTGATCTCCGGTTAACGCCGAGTTCCCTGCAGAAAGCGTCAGGGTACAGTTGCAGACCGGAAATCGGCCGGCCCGGCACGCCGTCTATGAACTCGGAAGAATCGGTGACGACGACGGCGTGCTTGGAAAATGGACTTGGATATCACTACGCTCACGGCGGAGACCGGCGACTTCTCAATCTTTTCACGTGA 714 0.5644 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRAGLMSFISNVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRSIPELIGSDAPTLATDEASEAEVTCTDMWSIRDRNPTSRFTNSRSNKFSSCKRKRLEESSKPYTTDLDLRLTPSSLQKASGYSCRPEIGRPGTPSMNSEESVTTTACLENGLGYHYAHGGDRRLLNLFT 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1378 237 MobiDBLite consensus disorder prediction 188 208 - -
Bisa11g1378 237 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bisa11g1378 237 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bisa11g1378 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1378 Bisa-ChrBisa11 33223977 33224788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1378 1 236 AS2 family AT3G49940 59.533 1.90e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa11g1378 LOB 4.6e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2079 01 36727172 36727982 Bisa11g1378 11 33223977 33224788 CCT
Bisa11g1378 11 33223977 33224788 Bisa01g2079 01 36727172 36727982 ECH
Bisa11g1378 11 33223977 33224788 Bisa11g1378 11 33223977 33224788 ECH