Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1374 ATGGCGGCAACTGGAAGATGGCGCCAGATTATGGGTCACGTCACCATCACGCCTTATAATTATCGACTTGCGCCATCCTCTCAATCATTTTCTTACATTATTGCCGTCAGCCCCTTCGCTGCTTCTGCGGCAGCTTTGCTATCAGGTCCCCACCAGTATCATCCGCCACCGCAGCCACACGACCACCGCCTGCGGCCTCCGTCACAACTGAACACCCTGGCTCAGAAGATTGGAAAATCGACTCGCCGTTCTGGCGCCTCCTCTAAGGCAAGGGTTTATGCTGATGTCAACGTTGTCCGTCCTAAGGATTACTGGGACTATGAGTCCCTAACCGTTCAGTGGGGGGAGCAAGATGATTATGAAGTAGTGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAGGGTGTTCACTGCACAAATAATGAAAAATGTGTTATCAAGATTCTCAAACCAGTGAAGAAAAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGGCCTAATATTGTAAAGTTGCTTGACATTGTTAGGGACCAGCAATCAAAGACTCCAAGCCTAATTTTTGAATATGTTAATAACACTGATTTTAAAGTTCTCTATCCCACATTATCAGACTACGATATACGATATTACATCTATGAACTTCTGAAGGCCCTGGATTATTGCCATTCACAAGGAATCATGCATCGGGATGTTAAGCCACATAATGTAATGATTGATCATGAACAGCGTAAGCTTCGTCTAATAGATTGGGGGCTGGCTGAGTTCTATCATCCTGGCAAAGAATATAACGTCCGTGTTGCATCAAGATATTTTAAAGGCCCCGAGCTTCTTGTTGATCTTCAAGATTATGATTACTCTTTAGATCTGTGGAGCCTTGGATGTATGTTTGCTGGAATGATATTCCGTAAGGAGCCATTCTTTTATGGGCATGATAATAATGATCAACTAGTTAAAATAGCGAAGGTAATTGGGACAGATGAATTGTATGCATATCTGAGCAAGTATCGTATAGAGTTGGACCCACATTTTGCTGCACTTATTGGGAGGCATAGCCGGAAGCCATGGGCAAAATTCATTAATGCAGACAATCAACACTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTGCTGCAGTATGATCACCAAGTACGACCCACTGCAAAAGAAGCCATGGCCCATCCTTACTTCAATCCAGTCAGAAATGCAGAAAGTAGTAGAGCTCGTACGCACTGA 1260 0.4413 MAATGRWRQIMGHVTITPYNYRLAPSSQSFSYIIAVSPFAASAAALLSGPHQYHPPPQPHDHRLRPPSQLNTLAQKIGKSTRRSGASSKARVYADVNVVRPKDYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTNNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNNDQLVKIAKVIGTDELYAYLSKYRIELDPHFAALIGRHSRKPWAKFINADNQHLAVPEAVDFVDKLLQYDHQVRPTAKEAMAHPYFNPVRNAESSRARTH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1374 419 PANTHER CASEIN KINASE II SUBUNIT ALPHA 80 414 IPR045216 GO:0004674|GO:0006468
Bisa11g1374 419 FunFam Casein kinase II subunit alpha 106 196 - -
Bisa11g1374 419 Gene3D Phosphorylase Kinase; domain 1 120 196 - -
Bisa11g1374 419 ProSiteProfiles Protein kinase domain profile. 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1374 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Bisa11g1374 419 Gene3D Transferase(Phosphotransferase) domain 1 197 405 - -
Bisa11g1374 419 SMART serkin_6 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1374 419 FunFam Casein kinase II subunit alpha 197 408 - -
Bisa11g1374 419 Pfam Protein kinase domain 120 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1374 419 CDD STKc_CK2_alpha 101 405 IPR045216 GO:0004674|GO:0006468
Bisa11g1374 419 SUPERFAMILY Protein kinase-like (PK-like) 90 409 IPR011009 -
Bisa11g1374 419 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1374 Bisa-ChrBisa11 33159917 33168481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1374 118 406 Core Cell Cycle Gene Families AT1G76540 31.210 1.79e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bisa11g1374 Pkinase 1.5e-64 CL0016