Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1373 ATGGGAGATAAGAGAAGGAGGGTGGTGGTCAGAGAATTCGACGCTGATAAAGACAGAGAAAGAGTGGAAGCCGTGGAAAGGATATGCGAGGTTGGACCCAGTGGGAAGCTCTCCCTCTTCACCGACCTCATGGGTGACCCTATTTGCAGGGTCCGCCACTCACCTGCTTTCCTCATGCTGGTGGCTGAGATAGGCAAAGACATAGTAGGAATGATAAGGGGCTGCATCAAAACCGTTACATGCGGAAAGAAGCTATCCAGAAACGGAAAGAACCCCCACTTCACTAACAACAACGCCGATACCACTCACAAACACGTCCCTGTCTACACCAAAGTCGCCTACATTTTAGGCCTTCGCGTTTCGCCTTCTTTCCGGAGAATGGGAATAGGGTTGAAGCTGGTGCATAGAATGGAGCAGTGGTTCAGAGATAATGGGGCTGAATACTCCTACATAGCGACGGAAAACGACAATTTAGCGTCTGTTAATCTCTTCACCGACAAATGCGGGTACTCCAAGTTCCGTACTCCCTCCATCCTGGTCAACCCCGTCTTCGCTCATCGACAGAAGCTGTCCCCCAGGATCACCGTCATCCGACTCAGCCCCTCCGACGCCGAGGGCCTCTACCGCGGCCGCTTCGCCACCACCGAGTTCTTCCCCCGCGACATTGACTCCGTTATCAACAACAAGCTCACCCTCGGCACCTTCCTCGCCGTCCCGAGCGGGTCCCATATCGCCGAGACATGGGCCGGGCTGGATAGCTTCCTGTCGGACCCACCAGAGTCCTGGGCAGTGCTTAGCGTCTGGAACTGCAAGGACGTGTTCACGCTCGAGGTGCGGGGCGTGTCGCGCGTGAAGCGAGCCCTAGCGAAAACGACCCGGATTTTGGACCGGGCCTTACCGTGGCTTAGGCTACCGTCGTTTCCGAACTTCTTCAAGCCGTTCGGGTTCCACTTCATGTACGGGCTTGGGGGCGTAGGCCCAGAAAAGGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCGCATAACTTGGCCAAGGACCATGGTTGTGGTGCGGTGGCTACGGAGGTCTCGAGCTGCGATCCACTCAGGTTCGGCGTACCACACTGGAAGATGCTATCCTGCCCCGAGGACTTATGGTGCATCAAGCGGCTCGGGGAAGACTATAGTGACGGCTCTGTCGGTGACTGGACCAAGTCTCCAGCTGGACGGTCCATTTTTGTTGACCCGAGAGAGATCTAA 1239 0.5601 MGDKRRRVVVREFDADKDRERVEAVERICEVGPSGKLSLFTDLMGDPICRVRHSPAFLMLVAEIGKDIVGMIRGCIKTVTCGKKLSRNGKNPHFTNNNADTTHKHVPVYTKVAYILGLRVSPSFRRMGIGLKLVHRMEQWFRDNGAEYSYIATENDNLASVNLFTDKCGYSKFRTPSILVNPVFAHRQKLSPRITVIRLSPSDAEGLYRGRFATTEFFPRDIDSVINNKLTLGTFLAVPSGSHIAETWAGLDSFLSDPPESWAVLSVWNCKDVFTLEVRGVSRVKRALAKTTRILDRALPWLRLPSFPNFFKPFGFHFMYGLGGVGPEKVKMVKALCGFAHNLAKDHGCGAVATEVSSCDPLRFGVPHWKMLSCPEDLWCIKRLGEDYSDGSVGDWTKSPAGRSIFVDPREI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1373 412 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 191 IPR000182 GO:0016747
Bisa11g1373 412 Pfam Acetyltransferase (GNAT) family 52 170 IPR000182 GO:0016747
Bisa11g1373 412 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 412 - -
Bisa11g1373 412 CDD NAT_SF 59 148 - -
Bisa11g1373 412 FunFam Probable N-acetyltransferase HLS1-like 17 177 - -
Bisa11g1373 412 Gene3D - 44 176 - -
Bisa11g1373 412 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 172 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1373 Bisa-ChrBisa11 33135138 33136712 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Bisa11g1373 Acetyltransf_1 7.8e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1373 11 33135138 33136712 Bisa01g2088 01 36858467 36860026 CCT
Bisa11g1373 11 33135138 33136712 Bisa11g1373 11 33135138 33136712 ECH