LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g1367	ATGAAAGCTCAACATTTGAGCTTCTTTTTGATCGTATTATTGTCTCTATCTGTCAGAGTCCCCACTGCAAAAGGGGTCAACACCATCCAATTCCGCAGTGTGAATGAATCTCAGACTAGAAGAATTCTGCACCAGCCATTGTTTCCGGCGTCCTCTGCTCCGCCTCCAGGTACCGACACGCCTCCACCGCCGCCGCCATACACCACTCCACCTTCTCCCGACACCGACATTCCTTTCTTCCATGAGTATCCCGCAGGGCCACCACCAGATCAGACTCAGCCTCCACCTTCCACTCCCAATGGCACAATTGCGAACCCAACGGCAACGCAACCGACCAAGCCGACAAAGAAGGTTGCAATTGCAATCTCTGTCGGAATTGTGACGCTTGGGATGCTCTCGGCACTTGCCTTCTTCTTGTACAAGCATCGGGCCAGACACCCCATCGAGACCCAGAAGCTCGTCGGTGCGAATTCTCAGAGGATTCCTGACGATCCAAGAGTGCCACAATCGAGCTTCCTCTACATTGGAACTGTGGAGCCAAGCCAAACATCAGTGACTGGGCCAAGTGAAGCCAATGGAGCAAACAGGTCTCCTTATCACAAGCTCAATTCTATTAAGCGATCTGAAAGATACCGTCCCAGTCCTGAATTGCAACCATTGCCGCCATTGAGCAAGCCTCCAGATGGGAATTACCCACCGACGGTATCCTCATCCTCCTCCGACGACGAGGAAAGTCACGAGACGGTGTTTCATTCGCCACAGGGGTCATCCCTTAGTCACGAGGATACCTATTACACACCAGTTTCGCGTCATAGTTCTCTGGCTAACAGTGGCCTTGGGGCATCAGGTAGGAGTGAGACCCATTCCATACCTTCAATTCCTTATTCAAAGAGAACTTCACCAAAATCTCGGCTTTCGGCTTCATCGCCGGATATCAGGCATGTCATGATACCGTCGATAAAGCAAACTCCGCCAATTCCTGTACCTACACCTGCTTCCGGTTTGCCGCCGCCGGCATCACCACTTTCACAACCGTATCAGCGTCTGGATAAAGAAGTGGCTTCCGGTCCTTCCAGAAATCCGAAATTCTCAGCCCCTCCGCCAGCACCTAATTTGACCCGTCTTCAGTCAACAAACAACACACCCCCAAATGTGTCTAGTACTTCACTTAATCCTCCCCTTCCTCCGCCGCCACCACCACCACCACCTCCGCCCCGGCAATCAACGATACGGAAAGGGGAGTCTCCGGCAATCAGTGGTCCATCATCCTCTGCTTCGAGACACCACCAATCTAGCTCTCCAAGCCGTGGGGCCGCTTCTGATGATAGCGCAACAAAAACTTATGAAAATGCTGATAGAAGTGTCAGCTCTTCCGGGAGGCTTGAAGCCGATGACACGGATGGAGCGAAACCCAAGTTAAAGGCTTTGCATTGGGATAAAGTTCGTGCGACCTCAGACCGAGCTACAGTGTGGGACCAGCTAGAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAGACCTTGTTTGGCTGCAATTCCACGAATTTCGCCCCTAAAAAACAACCTATTAGAAAATCAGTTCTTCCACCTGTTGAAGCGGAGAACAGAGTGCTAGATCCGAAGAAGTCGCAAAACATAGCTATTCTACTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGACGCCCTTCTAGATGGGAATCCTGAAGGTTTAGGTGCCGAGCTTCTGGAAACTCTAGTAAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTCAAGAACTATAGTGGTGACCTCTCAAAACTTGGGTCAGCTGAAAGATTTCTTAAACAAGTGCTTGATATCCCTCTTGCCTTTAAAAGAGTTGAAGCCATGCTATACAGAGCTAACTTTGATGCGGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTTGAGATGGGAAGTGAGGAATTGAAAAACAGCCGCTTGTTCCTCAAACTACTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTGGGCACCAATCGGGGTGATGCTAAAGCTTTTAAGCTGGACACACTCTTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACGACACTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGTTACTAGTGGTGATTCTGCAAACGAGAATGTTCAGAACCAAATGAATTCCAAATTCAGTGAGGACGAGTTCAAGAAACAAGGGCTGCAGGTTGTGGCTGGGCTCAGTAGAGACCTCAGTAATGTCAAAAAAGCGGCGGGAATGGACTCTGATGTCTTAAGCAGCTACGTCTCAAAGCTTGAAAAGGGTCTTGATAAAGTGAGATTGGTTTTGCAATATGAGAAGCCGGATATGCAAGGCAAGTTCTTTCCCTCCACGAAGCTATTCCTGAAAGAAGCTGAAGAGGAGATTGCTAGAATTAAGGCTGATGAAAGCAAAGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGACGCAGGCAAGGAAGAGGCCCACCCCTTCAGAATCTTTATGATTGTAAGAGACTTCCTAAATATTTTGGATCAAGTGTGCAAAGAAGTCGGAATGCAGGACAGAACTGTAATTGGTTCAGCCAGATCCTTTCGGATAGCTGCAAATGCATCGTTACCTGTTCTTAACAGATATAATGCGAGACAAGATAGAAGCTCAGATGAAGAAAGCTCGTCACCCTAA	2736	0.4777	MKAQHLSFFLIVLLSLSVRVPTAKGVNTIQFRSVNESQTRRILHQPLFPASSAPPPGTDTPPPPPPYTTPPSPDTDIPFFHEYPAGPPPDQTQPPPSTPNGTIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYKHRARHPIETQKLVGANSQRIPDDPRVPQSSFLYIGTVEPSQTSVTGPSEANGANRSPYHKLNSIKRSERYRPSPELQPLPPLSKPPDGNYPPTVSSSSSDDEESHETVFHSPQGSSLSHEDTYYTPVSRHSSLANSGLGASGRSETHSIPSIPYSKRTSPKSRLSASSPDIRHVMIPSIKQTPPIPVPTPASGLPPPASPLSQPYQRLDKEVASGPSRNPKFSAPPPAPNLTRLQSTNNTPPNVSSTSLNPPLPPPPPPPPPPPRQSTIRKGESPAISGPSSSASRHHQSSSPSRGAASDDSATKTYENADRSVSSSGRLEADDTDGAKPKLKALHWDKVRATSDRATVWDQLESSSFQLNEDMMETLFGCNSTNFAPKKQPIRKSVLPPVEAENRVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYSGDLSKLGSAERFLKQVLDIPLAFKRVEAMLYRANFDAEVNYLRKSFQTLEMGSEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEVTSGDSANENVQNQMNSKFSEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLEKGLDKVRLVLQYEKPDMQGKFFPSTKLFLKEAEEEIARIKADESKALFLVKEVTEYFHGDAGKEEAHPFRIFMIVRDFLNILDQVCKEVGMQDRTVIGSARSFRIAANASLPVLNRYNARQDRSSDEESSSP	911

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g1367	911	Pfam	Formin Homology 2 Domain	466	861	IPR015425	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	179	201	-	-
	Bisa11g1367	911	SMART	it6_source	463	876	IPR015425	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	47	114	-	-
	Bisa11g1367	911	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	463	887	IPR015425	-
	Bisa11g1367	911	PANTHER	FORMIN-RELATED	9	905	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	388	409	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	82	101	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	179	468	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	370	387	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	412	457	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	250	307	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	49	73	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	215	229	-	-
	Bisa11g1367	911	Gene3D	Formin, FH2 domain	461	873	IPR042201	-
	Bisa11g1367	911	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	395	869	-	-
	Bisa11g1367	911	MobiDBLite	consensus disorder prediction	322	343	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g1367	Bisa-ChrBisa11	33065436	33069145	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa11g1367	33	901	FH2 protein (formin) Gene Family	AT5G67470	58.875	0.0	852

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa11g1367	11	33065436	33069145	Bisa11g1367	11	33065436	33069145	ECH