Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1362 ATGGACAGTTATATAGACCGACACTTCGGAAGAGTGAAGTCCAAGAACTCCTCTGAAGAAGCTCTTGAGAAATGGAGGTCACTGTGCAGCGTAGTGAAGAACCCCAAACGACGCTTTCGTTTCACCGCCAATCTCTCCAAGCGAGAGGAAGCAGCTGCTATGCGTCGTACCAATCAGAAGAAGCTGAGGGTTGCTGTTCTTGTTTCCAAAGCTGCATTTCAATTTATACAAGGTGTGCAACTAAGTGATTATACTGTACCTGAGGATGTTAAAGCTGCAGGTTTTCAGATCTGTGCCGAGGAGTTGGGGTCTATTGTTGAAGGCCATGATTTAAAGAAGCTTCTCTATCATGGTGGGGTTAGTGGTCTTGCAAATAAGCTTTCTACGTCAACCACTGACGGGCTTAGCAACGATACTAATTTACTGAATAAGAGACAGCAGATTTACGGAATCAACAAATTTGCTGAGACTGGGGTCCGGAGTTTCTGGGTTTTTGTATGGGAAGCCCTTCAAGACATGACTCTTATGATCCTTGGAGTGTGTGCTATTATGTCTCTCATAGTTGGCATAGCAATGGAAGGATGGCCCCATGGGGCCCATGATGGGCTTGGAATTGTTGCCAGTATCTTACTGGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCACTGCAATTCAAGGATTTGGACAAGGAGAAGAAGAAGATTGCCATTCAGGTCACAAGAAATAGTTATAGGCACAAAATGTCAATATATGAGTTACTTCCTGGTGATATTGTGCATCTTGCCATAGGAGACCAAGTCCCAGCAGATGGACTATTTATTTCAGGATTTTCTGTGTTGATTGATGAGTCAAGTTTGACTGGAGAGAGTGAACCAGTGATGGTGAGTTCTGAAAATCCGTTTCTTCTCTCTGGAACTAAGGTCCAAGATGGATCTTGCAAGATGATGGTAACTACAGTAGGAATGAGGACTCAATGGGGCAAGTTAATGGCCACTCTCAGTGAAGGAGGAGATGATGAAACACCATTACAGGTGAAGTTGAATGGAGTTGCTACCATTATAGGGAAGATAGGCCTATTCTTTGCTGTAATTACTTTTGCAGTTTTAGTGCAAGGACTTGTGACCCGTAAATTCCAACAACAAAGTTTATTGTCCTGGTCTGGAGATGATGCCTTGGAGCTCTTGGAATTCTTTGCTGTTGCAGTTACAATTGTTGTTGTTGCTGTTCCAGAGGGTCTGCCATTAGCTGTCACATTGAGCCTTGCTTTTGCTATGAAGAAGATGATGAATGACAAGGCCCTTGTCCGACACTTGGCGGCTTGTGAGACCATGGGATCAGCCACAACAATATGCAGTGACAAGACAGGAACATTAACTACCAACCACATGACAGTTGTGAAAACATGCATTTGTATGAACAACAAGGAAGTGGGTAATAATGCTTCTACCTTGTGCTCTGATCTCCCTGCTTCTGCTGTGAAACTGCTCCTACAGTCAATATTTATTAACACTGGAGGAGAAGTTGTGATCAACGAAAACGGGAAACGCGAGATTTTGGGGACACCAACTGAGACTGCGATATTGGAGCTAGGGTTGTCACTAGGTGGTGATATTCAAGCAGAGAGACAAGCAATTAAACTTGTCAAAGTTGAGCCATTTAACTCTACAAAGAAAAGGATGGGTGCGGTTGTGGAGCTTCCTGAAGGAGGAGGCTTCAGAGCCCACACTAAAGGAGCTTCTGAAATAATCCTGGCTGCCTGTGACAAGGTGCTCAATTCCAAAGGTGAGGTTGTTCCACTTGATAAAGAATCAATTAAACATCTTGAGGTTACAATCAACCAATTTGCAAATGAGGCTCTCAGAACTCTATGCCTTGCCTATATGGACGTGGAAAAGAAATTCTCTGCTGATGACCCCATTCCAATTTCTGGGTATACTCTTATTGGAATTGTTGGTATTAAGGATCCTGTTCGTCCTGGCGTTAGGGAATCTGTTGCAGTTTGTCGTTCAGCTGGTATTAAAGTAAGGATGGTTACAGGTGACAATATTAATACTGCAAAGGCTATAGCTAGAGAGTGTGGAATTTTAACAGATGATGGTATAGCCATTGAAGGTCCAGAATTTAGAGAGAAGAGTCAGGAGGAATTGCTCAAACTGATTCCAAAAATTCAGGTTATGGCGCGATCTTCACCTTTGGACAAGCATACATTGGTAAAACACCTGCGTACCACATTTGGGGAAGTTGTAGCTGTAACTGGTGATGGTACAAATGATGCCCCAGCTCTTCATGAGGCAGACATTGGACTTGCAATGGGCATTGCTGGAACTGAAGTTGCTAAAGAAAGTGCAGATGTCATCATTTTGGATGATAATTTCTCCACAATTGTGACAGTGGCTAAATGGGGACGTTCAGTTTACATAAACATTCAGAAATTCGTACAGTTCCAACTGACTGTTAATGTGGTTGCATTAATAGTGAACTTTACTTCAGCATGCCTGACAGGAAATGCACCTCTCACAGCTGTACAACTACTGTGGGTGAACATGATAATGGACACACTGGGAGCTTTGGCACTTGCAACTGAACCTCCAAATGCTGAATTGATGAAGCGTTTGCCAGTGGGAAGGAAGGGGAACTTCATTAGCAACATCATGTGGAGGAACATCCTAGGACAATCATTGTATCAGATTTGTGTGATATGGTTTCTTCAGACCAACGGAAAACAGTACTTTCATCTCGATGGACCTGATGCTGACCTGGTCTTAAACACACTTATTTTCAACTCATTTGTCTTCTGTCAGGAAAGAAGCCTCTGA 2823 0.4311 MDSYIDRHFGRVKSKNSSEEALEKWRSLCSVVKNPKRRFRFTANLSKREEAAAMRRTNQKKLRVAVLVSKAAFQFIQGVQLSDYTVPEDVKAAGFQICAEELGSIVEGHDLKKLLYHGGVSGLANKLSTSTTDGLSNDTNLLNKRQQIYGINKFAETGVRSFWVFVWEALQDMTLMILGVCAIMSLIVGIAMEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIAIQVTRNSYRHKMSIYELLPGDIVHLAIGDQVPADGLFISGFSVLIDESSLTGESEPVMVSSENPFLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLVTRKFQQQSLLSWSGDDALELLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCICMNNKEVGNNASTLCSDLPASAVKLLLQSIFINTGGEVVINENGKREILGTPTETAILELGLSLGGDIQAERQAIKLVKVEPFNSTKKRMGAVVELPEGGGFRAHTKGASEIILAACDKVLNSKGEVVPLDKESIKHLEVTINQFANEALRTLCLAYMDVEKKFSADDPIPISGYTLIGIVGIKDPVRPGVRESVAVCRSAGIKVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSQEELLKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNAELMKRLPVGRKGNFISNIMWRNILGQSLYQICVIWFLQTNGKQYFHLDGPDADLVLNTLIFNSFVFCQERSL 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1362 940 Gene3D - 17 77 - -
Bisa11g1362 940 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Bisa11g1362 940 FunFam Calcium-transporting ATPase 651 799 - -
Bisa11g1362 940 Gene3D - 141 336 - -
Bisa11g1362 940 FunFam Calcium-transporting ATPase 216 336 - -
Bisa11g1362 940 SUPERFAMILY HAD-like 451 859 IPR036412 -
Bisa11g1362 940 SMART Cation_ATPase_N_a_2 114 190 IPR004014 -
Bisa11g1362 940 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 936 IPR023298 -
Bisa11g1362 940 Pfam Cation transporting ATPase, C-terminus 839 936 IPR006068 -
Bisa11g1362 940 SFLD p-type atpase 435 806 IPR044492 -
Bisa11g1362 940 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Bisa11g1362 940 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Bisa11g1362 940 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Bisa11g1362 940 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Bisa11g1362 940 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Bisa11g1362 940 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Bisa11g1362 940 SFLD C1.7: P-type atpase like 435 806 - -
Bisa11g1362 940 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g1362 940 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g1362 940 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g1362 940 FunFam Calcium-transporting ATPase 463 658 - -
Bisa11g1362 940 FunFam Calcium-transporting ATPase 17 77 - -
Bisa11g1362 940 PANTHER CATION TRANSPORTING ATPASE 59 936 - -
Bisa11g1362 940 Pfam Cation transport ATPase (P-type) 513 592 - -
Bisa11g1362 940 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 936 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bisa11g1362 940 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
Bisa11g1362 940 Pfam E1-E2 ATPase 238 431 - -
Bisa11g1362 940 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Bisa11g1362 940 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 50 IPR024750 GO:0005516
Bisa11g1362 940 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Bisa11g1362 940 NCBIfam HAD-IC family P-type ATPase 205 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g1362 940 NCBIfam HAD-IC family P-type ATPase 545 699 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g1362 940 NCBIfam HAD-IC family P-type ATPase 724 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g1362 940 CDD P-type_ATPase_Ca_PMCA-like 142 887 - -
Bisa11g1362 940 Gene3D - 450 799 IPR023214 -
Bisa11g1362 940 FunFam Calcium-transporting ATPase 771 938 - -
Bisa11g1362 940 Gene3D - 168 907 - -
Bisa11g1362 940 Gene3D - 463 658 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1362 Bisa-ChrBisa11 32965457 32971854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1362 1 936 Primary Pumps ATPases AT4G37640 83.013 0.0 1598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1362 11 32965457 32971854 Bisa11g1362 11 32965457 32971854 ECH