Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1358 ATGGTTTTGGTTGAATTCCTAGCAAATGAGATATATTGGGGAACAACAGAAGCCAGGAGAAAGCCGCTGGTAGAGCCCCTTCCTCCTCGGAGAGCAAAAATGAAGTACAATCCCAGGGTCTCAAGCTCTCGTCGCAAGAACCGCAAGGCCCACTTCACTGCGCCGTCCAGCGTTCGTCGTATTCTGATGAGTGCGCCGCTCTCGAACGACCTCCGCTCCAAGTACAACGTGCGGTCCATGCCGATTCGCAAGGACGACGAGGTGCAAGTTGTTCGAGGTACGTACAAGGGGCGTGAGGGAAAGGTGGTTCAGGTCTACCGCCGTAAATGGGTCATCCACATCGAGCGGATTACCCGTGAGAAGGTAAATGGTTCAACCGTTAATGTTGGGATTAACCCCTCTAAAGTGGTCATCACTAAGCTGAGGTTGGATAAGGACCGCAAGTCCTTGCTTGATCGCAAGGCCAAGGGGCGTGCGGCGGCCGACAAGGTCAAGGGAACCAAGTTCACTGCTGAGGACATCATGCAGAATGTTGATTAG 540 0.5315 MVLVEFLANEIYWGTTEARRKPLVEPLPPRRAKMKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKVKGTKFTAEDIMQNVD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1358 179 MobiDBLite consensus disorder prediction 37 53 - -
Bisa11g1358 179 SUPERFAMILY Translation proteins SH3-like domain 41 158 IPR008991 -
Bisa11g1358 179 Hamap 50S ribosomal protein L24 [rplX]. 33 154 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bisa11g1358 179 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 34 175 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bisa11g1358 179 FunFam 60S ribosomal protein L26 34 177 - -
Bisa11g1358 179 SMART kow_9 81 108 IPR005824 -
Bisa11g1358 179 Gene3D - 34 177 IPR014722 -
Bisa11g1358 179 CDD KOW_RPL26 85 138 IPR041988 GO:0003723
Bisa11g1358 179 Pfam KOW motif 84 115 IPR005824 -
Bisa11g1358 179 MobiDBLite consensus disorder prediction 33 53 - -
Bisa11g1358 179 NCBIfam 50S ribosomal protein L24 41 155 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bisa11g1358 179 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 41 154 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bisa11g1358 179 ProSitePatterns Ribosomal protein L24 signature. 85 102 IPR005825 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1358 Bisa-ChrBisa11 32879765 32880714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1358 34 179 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 89.726 5.19e-95 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1358 11 32879765 32880714 Bisa11g1358 11 32879765 32880714 ECH