LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa11g1349	ATGGCGCCTTCCATGTGTACCCCTTGCGTTTCTCTTCACAGTACTCCGAAATTCTCAGATTTCTACTTCCACCTACATAATGAACTATGCTATCCTTCTCACCGTTTCTACTCACAACTGAATGTAAACTCTTGTTCCCTAAAACCCTTAACTTTGGCCGCCGATGCTGGTGCGAAGCGTAATAGGGGATTCTCTACCAAATGCAATGTGTTCAACGAAGAAATGAGAGGGAACGTGGAACAGGAGAGCTATAGCTCCGTGGAAGATAAGCAATTTGTGCGCTGGTTTCGTGAGGCGTGGCCTTACTTGTGGGCCCATGGGGGCGGCACCTTCGTTGTGATTATTTCCGGTGAAATTGTCGCTAGTCCTTTCTTAGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAAGCTTTTGACTGAGAGAGGGAGCCAACCCAAGTATGTTGGTCGTTATAGGATTACTGATGATGAATCTCTTGCTGCTGCAATGGAAGCAGCAGGGGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCGGGGCCCTCCATATGCAACATTCGTAGACATGGTGACAATAGCCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTCGCAGCCAAGAGAAAAGGAGTTGTTGATGGAATTGACTATAGGTCAACTGGAGAAGTTAAAAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATTGTAATTTTAAGTAACCTGGGCTATTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCTACGGCTTGTGCCTTAGCTATTGGATCAGACAAGCTTATTTGTATTATGGATGGACCAATACTTGATGAGAGTGGACGCCTTATTCATTTCTTGCCTCTTCCAGAAGCAGATTTGTTAATTCGTAAACGGGCTGAGCAAAGTGAAATAGCTGCTAGCTATGTGAAAGCTGTTGATGAGGATAGTTTCAGCTCTCTTGGTTATAAAAATTCTAATGGGACAGCCCAGTCTCCACAGAATGGAGAGGCTTTTACCAGAATTCATAATGCAACCTTTCATAATGGTGTTGGTTTTGACAATGGGAATGGCCTATGGTCTGGTGAACAAGGTTTTGCTATTGGAGGTCAGGAGCGGCTAAGCCGAATGAACGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGCAGAGGAGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACGATGGTTGCCAGCGATCTGTACGAAGGCACTCGGATGGCTCGAGTTGCAGATCTTCCTGGAGTAAAACAACTTATTCAGCCTCTGGAGGCATCTGGTGTACTTGTTAAGCGGACTGATGATGAGTTGCGTCAATCAATAGACTCCTTTATTGTTATGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCACTGTTTCCTTTCTTTGAGGAGAAGTGTGGAGAAGTTGCTGCTATTGCAGTGTCTCCTGACTGTCGAGGCCAAGGACAGGGTGACAAATTGCTCGATTATATTGAAAAGAAGGCTTCTTCTCTTGGGTTGAATATGCTTTTCCTGCTTACAACTCGCACAGCCGATTGGTTTGTGAGACGTGGGTTTTCAGAATGTTCAATTGATTTTATACCGGAAAAGAGAAGGGAAAAAATCAATCTGTCCCGTAATTCAAAGTATTATATGAAGAGGCTTCTCCCTGACAGAAGTGGAATTACTGTTGGTACGAAATTTTCACAGGGTTAG	1863	0.4412	MAPSMCTPCVSLHSTPKFSDFYFHLHNELCYPSHRFYSQLNVNSCSLKPLTLAADAGAKRNRGFSTKCNVFNEEMRGNVEQESYSSVEDKQFVRWFREAWPYLWAHGGGTFVVIISGEIVASPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLTERGSQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRKGVVDGIDYRSTGEVKKVDVSRMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGSDKLICIMDGPILDESGRLIHFLPLPEADLLIRKRAEQSEIAASYVKAVDEDSFSSLGYKNSNGTAQSPQNGEAFTRIHNATFHNGVGFDNGNGLWSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARVADLPGVKQLIQPLEASGVLVKRTDDELRQSIDSFIVMEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDFIPEKRREKINLSRNSKYYMKRLLPDRSGITVGTKFSQG	620

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa11g1349	620	PANTHER	AMINO-ACID ACETYLTRANSFERASE	71	612	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Bisa11g1349	620	CDD	AAK_NAGS-ABP	91	452	IPR033719	-
	Bisa11g1349	620	CDD	NAT_SF	499	561	-	-
	Bisa11g1349	620	Gene3D	-	458	604	-	-
	Bisa11g1349	620	Gene3D	-	90	457	IPR036393	-
	Bisa11g1349	620	Pfam	Acetyltransferase (GNAT) family	495	563	IPR000182	GO:0016747
	Bisa11g1349	620	SUPERFAMILY	Carbamate kinase-like	90	326	IPR036393	-
	Bisa11g1349	620	NCBIfam	amino-acid N-acetyltransferase	413	604	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Bisa11g1349	620	Hamap	Amino-acid acetyltransferase [argA].	85	604	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Bisa11g1349	620	Pfam	Amino acid kinase family	111	312	IPR001048	-
	Bisa11g1349	620	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	461	608	IPR016181	-
	Bisa11g1349	620	SUPERFAMILY	Carbamate kinase-like	406	454	IPR036393	-
	Bisa11g1349	620	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	458	606	IPR000182	GO:0016747

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa11g1349	Bisa-ChrBisa11	32809542	32815076	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Bisa11g1349		AA_kinase	3.9e-09	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa11g1349	11	32809542	32815076	Bisa01g2108	01	37250063	37257026	CCT