Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1330 ATGAAATCCATGGAAAATGATGCTGCTGCTGCTGCCAATGAAAACAACTGGTTGGGGTTCTCTCTCTCGCCTCATATGAATCTTGAAGTTCCTTCGGACTCTCATCACCAACATGAGGCACAAGTGACGACGCAACCTCCCTCGGCTGCTGCAGAAGCAGTTCCTGCAAGCTTTTATCACTCTATGTCCATGCCCCTTTCGAATTACGGTATTTACTATGGACTTGAAGGTGAAAATGTTGGCTTCTATTCACACTTTCCTGTCATGCCCCTCAAATCCGATGGCTCTCTCTATGTAATGGAACCTCAAACCAGGTCACAACCCCAAGCAATGGTAACATCTTCAACTCCGAAACTGGAGAATTTCTTAGGCACCTCGACAATGGGGACTCCTCACTATGAATGCAGTGCCAAAGAAACAATGCCTCTGAGCTTAGACAGTATTGTTTACACCAACCAATCATCACAACGGCAAGAAATCCTGGCCCAACCTTTCTCATCATACTATTCTGGCTTTAGAAGCGACATGATGTTGGAAGGGCCCAAGCAAAATGGAATTTCTGATTGCAACGTACAGGTCTCGAATATGGGTAGTGAGGATGGAGTTTCTGGAGTGAAGAGCTGGGTGATGAGAACCAACTCAAGTAACCATGGACAGGACACAAAGATGATTGTTGGTGTGGAGGGCAATGGAAGTGAATCTGGGTGCATTGGATCAATGGGGGCATATGGGGATTTGCAGTCACTGAGCTTGTCCATGAGTCCTGGCTCACAGTCAAGCTGTGTCACTAGTTCACAGCGAGCATCGCCTTCTGTCATTGATTCTGTTGGCGTGGATACAAAGAAAAGAGGATCTGAAAAGGTGGACCACAAGCAAATTATTCACAGAAAATCCTTAGATACCTTTGGCCAAAGAACCTCTCAATATAGAGGCGTAACAAGGCATAGATGGACTGGTAGATATGAAGCTCATCTTTGGGACAACAGTTGCAAAAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTAGCCGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAATATGAGCAGACAAGAATACGTTGCCCATTTACGAAGGAAAAGCAGTGGATTCTCTAGAGGAGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGAAGATGGCAGGCTCGAATTGGTAGGGTGGCTGGAAATAAAGATCTATATCTCGGAACCTTCAGTACGCAAGAGGAAGCAGCTGAAGCCTACGACATTGCTGCTATAAAATTCCGCGGAGTTAATGCCGTGACCAACTTTGACATAACAAGATACGATGTGGAAAAAATCATGGCGAGCAGTAATCTGCTTAGTGGTGAACTAGCCAGGCGAAACAATGATCAGGCTGTGGTTCATAAAACTTCTGCATATGATGAAACCCAAGAAGGCATTTCAATGCACAAGAGCTGCGAGACGCATGTCTCAAATCCTTCTCAATGGATCACAGAGCTTGACCAAAACCCTGCAAGAGTTGAGACCTACAGAGCTCAATCATTCTCAATGCCTTTAGATAACATGATTCATCATGTCTCTAATCCATCTTCATTAGTGACTAGCTTGAGCAGCTCACGTGAAGTAAGCCCTGATAAAACAAGCTTGCCAATGCTCTCTGAAATGCCTTCCTTGGTTACAAGCTTGAGGCCCCCACTTTCATTGCCTCATGTGCCAGTTTTTGCTGCTTGGACAGATGTTTAG 1836 0.4472 MKSMENDAAAAANENNWLGFSLSPHMNLEVPSDSHHQHEAQVTTQPPSAAAEAVPASFYHSMSMPLSNYGIYYGLEGENVGFYSHFPVMPLKSDGSLYVMEPQTRSQPQAMVTSSTPKLENFLGTSTMGTPHYECSAKETMPLSLDSIVYTNQSSQRQEILAQPFSSYYSGFRSDMMLEGPKQNGISDCNVQVSNMGSEDGVSGVKSWVMRTNSSNHGQDTKMIVGVEGNGSESGCIGSMGAYGDLQSLSLSMSPGSQSSCVTSSQRASPSVIDSVGVDTKKRGSEKVDHKQIIHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASSNLLSGELARRNNDQAVVHKTSAYDETQEGISMHKSCETHVSNPSQWITELDQNPARVETYRAQSFSMPLDNMIHHVSNPSSLVTSLSSSREVSPDKTSLPMLSEMPSLVTSLRPPLSLPHVPVFAAWTDV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1330 611 CDD AP2 409 470 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 112 507 - -
Bisa11g1330 611 Coils Coil 375 395 - -
Bisa11g1330 611 CDD AP2 307 374 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 ProSiteProfiles AP2/ERF domain profile. 308 374 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 SUPERFAMILY DNA-binding domain 409 469 IPR016177 GO:0003677
Bisa11g1330 611 Gene3D AP2/ERF domain 410 470 IPR036955 GO:0003700|GO:0006355
Bisa11g1330 611 Gene3D AP2/ERF domain 307 376 IPR036955 GO:0003700|GO:0006355
Bisa11g1330 611 ProSiteProfiles AP2/ERF domain profile. 410 468 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 SMART rav1_2 410 474 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 SMART rav1_2 308 380 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 SUPERFAMILY DNA-binding domain 307 376 IPR016177 GO:0003677
Bisa11g1330 611 FunFam AP2-like ethylene-responsive transcription factor 409 470 - -
Bisa11g1330 611 PRINTS Ethylene responsive element binding protein signature 450 470 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 PRINTS Ethylene responsive element binding protein signature 309 320 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 Pfam AP2 domain 411 460 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 Pfam AP2 domain 308 366 IPR001471 GO:0003700|GO:0006355
Bisa11g1330 611 FunFam AP2-like ethylene-responsive transcription factor ANT 307 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1330 Bisa-ChrBisa11 32543628 32546696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1330 1 610 AP2-EREBP Transcription Factor Family AT4G37750 48.447 2.28e-173 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa11g1330 AP2 1.1e-13 CL0081