Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1308 ATGGACGGATTCGGGTACTCGCTGGATGGGTTCGAGTTTCAGTCATTGTCGGGATCTGGGGACAGCTATAATTCTTCATACAATGAGTGCCTCAACTCCAAAAGCTCCCAGAACCAGAACTGCTTGCCTTGGGAAGTGGAAAGTCCAGAATCAGTAGCCCCAGCCAGACCCCACAAGCAACTCAAGCCCGGTAACTGGACCACCTCTTGCACCACCACCTCCTCTGACCCAATCTTGCCTCCCAACCCCGCTGCTTGTAATTCCACCTCCCAAATCATTTCTTTTGCCAACTCTAATTCCTCTTCATCTGTTGCTTCCCACAAGTTCTTCAGCTTGGACTCTGCCACTGTCAAGCCTAAAACAGAGAATGTCTATAATGACAACTTCGACTTCACAGCTTTCAATATCTCTGACTCCACCTATGACTATAATGACAAACTTGTGCTTAAACACGACAAAGGACTCATAGCCAATAAAGCCTCCAACGCCACCAGAAACCCCGTCCAAGCTCAAGACCACGTAATGGCCGAAAGAAAACGAAGAGAAAAACTCAGCCAGAGCTTCATTGCTCTCTCTGCCGTCCTCCCTGGCCTCAAAAAGATGGACAAGGCTTCAGTGCTAGGAGATGCAATAACGTATGTGAAACAACTACAGGAACGCGTGAAGACTCTGGAGGAACAAGTGGCCAAGAGGACAGTTGAATCAGCGGTGTTCGTGAACAGGTCTGTTCTGTTCGCCGATGACGAAAGCTCCTCCTCCGACGAGATTTCTAACACTACTTCCCACCAGCCACTCCCTGAAATCGAGGCAAGAGTTTCAGGGAAAGAGGTTCTCATCAGAATCCACTGTGACAAACACAACGGTTGTGCCCCTGCTATACTATCCCAATTAGAAAAGCTTCATCTCACCGTTCAGAGTAGCACCTTCTTGCCCTTCGGGAATACCACTCTTGATATCACCATTATTGCTCAGATGAACAATGAATACAACATGACAGCAAAGGATCTAGTGAAGAGCCTAAGACAGGCTTTGAGGCAATTCATGTGA 1047 0.4785 MDGFGYSLDGFEFQSLSGSGDSYNSSYNECLNSKSSQNQNCLPWEVESPESVAPARPHKQLKPGNWTTSCTTTSSDPILPPNPAACNSTSQIISFANSNSSSSVASHKFFSLDSATVKPKTENVYNDNFDFTAFNISDSTYDYNDKLVLKHDKGLIANKASNATRNPVQAQDHVMAERKRREKLSQSFIALSAVLPGLKKMDKASVLGDAITYVKQLQERVKTLEEQVAKRTVESAVFVNRSVLFADDESSSSDEISNTTSHQPLPEIEARVSGKEVLIRIHCDKHNGCAPAILSQLEKLHLTVQSSTFLPFGNTTLDITIIAQMNNEYNMTAKDLVKSLRQALRQFM 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1308 348 SMART finulus 174 223 IPR011598 GO:0046983
Bisa11g1308 348 Coils Coil 207 234 - -
Bisa11g1308 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 233 IPR036638 GO:0046983
Bisa11g1308 348 MobiDBLite consensus disorder prediction 47 83 - -
Bisa11g1308 348 CDD bHLH_AtNAI1_like 170 242 - -
Bisa11g1308 348 Gene3D - 158 232 IPR036638 GO:0046983
Bisa11g1308 348 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Bisa11g1308 348 PANTHER BHLH TRANSCRIPTION FACTOR 20 346 - -
Bisa11g1308 348 MobiDBLite consensus disorder prediction 62 83 - -
Bisa11g1308 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1308 Bisa-ChrBisa11 32236811 32238043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1308 159 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 52.880 4.04e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g1308 HLH 4.9e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1308 11 32236811 32238043 Bisa01g2159 01 38493814 38503841 CCT