Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1303 ATGGCTCTTCCGGAGATTGGTCTCCTCTCCATGACCCCGCAACCCCATCATCCCAATCAGCCTAACTCCACCACCTGGATGTGGAACCCTAGGGAAGAAGTCATAGCAGCAGAAGATGAAGAGTCATGGGAGGTGAGGGCCTTCGCAGAAGACACTAGAAACATGATGAACACCACGTGGCCTCCCAGGTCCTATACCTGCACCTTTTGCCACAGGGAGTTCCGTTCAGCCCAAGCTCTCGGCGGCCACATGAACGTCCACCGGCGCGACCGTGCCCGCCTCCACCAACTCCACCCCACCGCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCATCGTCCCCCCTAATGCCGCCGGCTTATGCCTTCTCTACCACTTACCAACAGCGCCTAATTCGGCAACCTTCCCTTCTCCTCCTCCGCCTCCTCCTCTGCCTCTATCTGCATGTGGGAATTCTCCGTCCACACTCCTGTCTTACCCACCAAACAGCTTTGATTTTCCAGTGGTATCATCACACTCGCCACCCACCATTGATATGTCCTCTTACTGTAACTCCGCCAAACTGGAACTGCCCTGTAATGGCCACGAAGAGCTTGATCTAGAGCTCCGCCTCGGCCACAGACCAAATTAA 639 0.5649 MALPEIGLLSMTPQPHHPNQPNSTTWMWNPREEVIAAEDEESWEVRAFAEDTRNMMNTTWPPRSYTCTFCHREFRSAQALGGHMNVHRRDRARLHQLHPTASSPSSSSSSSSSFIVPPNAAGLCLLYHLPTAPNSATFPSPPPPPPLPLSACGNSPSTLLSYPPNSFDFPVVSSHSPPTIDMSSYCNSAKLELPCNGHEELDLELRLGHRPN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1303 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Bisa11g1303 212 PANTHER OS07G0101800 PROTEIN 37 211 - -
Bisa11g1303 212 SMART c2h2final6 65 87 IPR013087 -
Bisa11g1303 212 MobiDBLite consensus disorder prediction 1 26 - -
Bisa11g1303 212 Pfam C2H2-type zinc finger 65 89 - -
Bisa11g1303 212 Gene3D Classic Zinc Finger 52 114 - -
Bisa11g1303 212 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Bisa11g1303 212 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1303 Bisa-ChrBisa11 32123010 32123648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1303 22 211 C2H2 Transcription Factor Family AT4G17810 37.745 9.44e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa11g1303 zf-C2H2_6 5.2e-07 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1303 11 32123010 32123648 Bisa11g1303 11 32123010 32123648 ECH