Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1299 ATGGATTCTCGGGAACCGCCTCAGCCCCCGCTACCGCCACATTTATCATCACAACCGCCATCAGCGCCGTCCAACATGATGGGGGGAGTCGTTTCCTATCCCTCCACCATGCCCAACCCCAACACTTCTTCCATGATCAGCCCCAATTCGGCGCCAATGATGATGGCCCCTGCCACCGCCCGATTCCCCTTTAACCAACTCGTCCAGCAAACCCCTACTCCTCCTCCTCCATCTAAGCCTTCTGAACCCTTAAGCAACACCAGTCCTTACGATGGCTCCTCCTCTGCGTTGAGGCCATGTGGGTTTAGCATTGATTCTACCAAGAAGAAAAGAGGCCGCCCCAGGAAGTACTCGCCGGATGGTAACATTGCTTTGGGTTTGGCTCCCACGCCTATGTCTTCTTCTTCTGCTCCCGGTGATGAGGGTGCCACACCGTCCGGAGAACCTTCAGTTAAAAAGAATAGGGGGAGGCCGCCAAGCTCTGGAAAGAAGCAGTTGGATGCTCTTGGAGCTGGTGGGACTGGCTTTACTCCACATGTAATCATGGTGAAAACCGGCGAGGACATTGCATCGAAAATTATGGCCTTCTCTGAACAAGGGCCACGTGCAGTTTGTATTCTTTCTGCTAATGGTGCAGTCTGCAATGCCACCCTTCGGCAACCAGCAATGTCTGGTGGTACTATGCATTATGAGGGCCGATATGAGATTATATCCCTATCAGGTTCTTTCATACTATCTGAAAATGGTGGTGGTAGTGGTAGAATGGGTGGTTTGAGTGCATCTCTTGCAGCGGCTGATGGAAAAGTTGTTGGTGGAGGAGTTGCTGGAATGCTAATTGCAGCATCACCGGTGCAGGTCATTGTGGGTAGCTTTGTTACGGAGGGGAGAAAGTCAAGCTCAAACGTGCCGAAGTCTGGGCATTCCTCAGTACCAGCAGCATCGTCCCAAATGTTAAATTTTGGTGCACCTATGACTCCAACCAGTCCTACCTCTCAAGGGCCTTCAAGTGACTCCTCAGATGACAATGGTGATAGTCCTTTTAATAGGGGGCCTGGGCCTGGCAGTCCTTACTTTTTAGCAAGATTGAGGAAGCTTGGGACTTTTGGCCGTCTTCAAAAGAGTTGTTTGTCGTATAGAGTAAAGATAACACAGCATGCTGCATTGATGGGCGAAGAAGGTAAAATGGTGACGGCAAGAGGATGTGTTTTGCGCGTTGCCGAACAAGGACTTCGTAACAATGCTCTGACCTCTGATGTTGACGCACTGACACTTACGTTGTGA 1281 0.5074 MDSREPPQPPLPPHLSSQPPSAPSNMMGGVVSYPSTMPNPNTSSMISPNSAPMMMAPATARFPFNQLVQQTPTPPPPSKPSEPLSNTSPYDGSSSALRPCGFSIDSTKKKRGRPRKYSPDGNIALGLAPTPMSSSSAPGDEGATPSGEPSVKKNRGRPPSSGKKQLDALGAGGTGFTPHVIMVKTGEDIASKIMAFSEQGPRAVCILSANGAVCNATLRQPAMSGGTMHYEGRYEIISLSGSFILSENGGGSGRMGGLSASLAAADGKVVGGGVAGMLIAASPVQVIVGSFVTEGRKSSSNVPKSGHSSVPAASSQMLNFGAPMTPTSPTSQGPSSDSSDDNGDSPFNRGPGPGSPYFLARLRKLGTFGRLQKSCLSYRVKITQHAALMGEEGKMVTARGCVLRVAEQGLRNNALTSDVDALTLTL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1299 426 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 70 348 IPR039605 GO:0003680
Bisa11g1299 426 CDD DUF296 177 291 IPR005175 -
Bisa11g1299 426 MobiDBLite consensus disorder prediction 69 83 - -
Bisa11g1299 426 MobiDBLite consensus disorder prediction 318 353 - -
Bisa11g1299 426 MobiDBLite consensus disorder prediction 20 50 - -
Bisa11g1299 426 SMART AT_hook_2 152 164 IPR017956 GO:0003677
Bisa11g1299 426 SMART AT_hook_2 108 120 IPR017956 GO:0003677
Bisa11g1299 426 Pfam Plants and Prokaryotes Conserved (PCC) domain 178 292 IPR005175 -
Bisa11g1299 426 MobiDBLite consensus disorder prediction 1 19 - -
Bisa11g1299 426 ProSiteProfiles PPC domain profile profile. 173 313 IPR005175 -
Bisa11g1299 426 Gene3D - 178 304 - -
Bisa11g1299 426 MobiDBLite consensus disorder prediction 318 345 - -
Bisa11g1299 426 MobiDBLite consensus disorder prediction 1 171 - -
Bisa11g1299 426 SUPERFAMILY AF0104/ALDC/Ptd012-like 175 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1299 Bisa-ChrBisa11 32023770 32029407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1299 90 333 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 53.623 3.34e-74 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1299 11 32023770 32029407 Bisa01g2169 01 38787359 38794129 CCT