Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1292 ATGCCAGTTCCACTTGCTCCCTACCCAACGCCCCCAGCTCCGTATACGCCTCCAGCCAATGCTGGACAGAGTCAGCTTGTGTGTTCAGGGTGTAGAAACCTTCTACTCTATCCTGTTGGAGCCACCTCTGTGTGCTGTGCTGTTTGCAATGCAGTCACAGCAGTGCCACCTCCCGGCACAGAAATGGCCCAGTTGGTATGCGGAGGCTGCCACACTTTACTCATGTACATCCGTGGAGCCACAAGCGTTCAATGCTCTTGCTGTCACACCGTCAATCTGGCTTTGGAAGCAAATCAAGTGGCGCATGTCAACTGTGGGAACTGCAGGATGTTGCTGATGTACCAATATGGAGCAAGATCCGTGAAATGCGCTGTCTGCAATTTTGTAACATCAGTTGGGGTATCAACAAGCACGACTGAGCAGAAGTTCAGCGCCTAG 438 0.5228 MPVPLAPYPTPPAPYTPPANAGQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGVSTSTTEQKFSA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1292 145 SUPERFAMILY Multiheme cytochromes 28 126 IPR036280 -
Bisa11g1292 145 NCBIfam zinc finger domain, LSD1 subclass 64 93 IPR005735 -
Bisa11g1292 145 NCBIfam zinc finger domain, LSD1 subclass 102 132 IPR005735 -
Bisa11g1292 145 NCBIfam zinc finger domain, LSD1 subclass 25 55 IPR005735 -
Bisa11g1292 145 PANTHER PROTEIN LSD1 16 55 IPR040319 -
Bisa11g1292 145 Pfam LSD1 zinc finger 105 129 IPR005735 -
Bisa11g1292 145 Pfam LSD1 zinc finger 67 91 IPR005735 -
Bisa11g1292 145 Pfam LSD1 zinc finger 28 52 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1292 Bisa-ChrBisa11 31998793 32000040 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bisa11g1292 zf-LSD1 8.8e-11 No_clan