Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1291 ATGGGTTGCTCTGTGAGAGAAAAACACACCCGATCGAATCCGAAGCCTCGGTCAGTCAAATCCGATACAGAGGACTGGTGTATAGACAGTTTTTTAATCTCCAAATCTATACTGGAATCAGGCCTCATGCCGTTGAAATGCCATATGGGTCTCAATGATTCAACTCAAAACCCTAATCCCAATTTGAACCCTGACCTTAACCCTACCCCTAATGTCGATGACAGCGGCTGGGGTTACTGCACAGAAGAACAATTGGAAGAAATTCTTTTGAAAAACTTGGAATTTTTATACAATGAAGCCGTATCAAAACTTGTTGCACTGGGGTATAAGGAGGAGATTGCTTTAAAAGCATTATTGCGAAATGGGCACTGTTATGGTGGGATGGATGTGTTGACAAACATATTGCATAACTCATTGGCTTATTTAAATAGTAATTGTAGTGGTGGTAATACTAGTAATGGCAATTTGGATGAGTCAGAGCCCGTGTTCACAGACTTGAGGCAGTTGGAGGAGTACTATCTAGCTGGTATGGTCTGCCTCTTGCAGCAAGTAAGGCCGCATTTGAGTAAAGGTGATGCCATGTGGTGTTTACTCATGAGTGATCTTCATGTAGGAAGGGCGAACTCTATGGAAATCCCAGTGCTTTCTGCATCAGGTGATGATAGTCCTACTTCTACTACTGTTGAGACTGTTAGCAATTCAGTTGGTCTCATGGCCCCAGCTCTGTGTAGGTTTCATGGAGGTTGGGGATTTGCAAATGGTGGAGCCTCAGATTTCCCCGCCAATGGATTAATCTCTTATGGTACAGACATGGCTTTACAGAGGGATATTGAATTCCCAAAGAGGTTTAATCTTTCGCCTTCTATGAAGTCCTTGTTGAAAAGAAATGTGGCAGTGTTTGCTGCTGGTCTAAGGGCAAACTCAGAACAATTGCAGTCACAAGCAAAAGCTTGTCCCAGCAATGGCACTTTGTCAATATTGGATTCTCCTGCTATACTGGGGACTGAAATTCCAGTTGAGCAGTCCATGGATTCTCAGAATCTGAATAACCAAGATGCTGTGAATTCAGTGCTGAGTAAATTTCGTGATCTAAATCTTGATGAGAATTTGGAGTCTGTGGCAGAAGATCACAAGGATGAGGTGATTTTCACTCTATTTCATCAGATTAAGGATCTTGAGAAACAGTCAAAGGAGCGAAAAGACTGGGCCCATCAGAAGGCAATGCAAGCTGCTAGAAAGCTAAGCCGTGATCTGACCGAGCTGAAAATGTTGAGGATGGAGAGAGAAGAGACTCAAAGATTGAAGAAAGGGAAACAGACCCTTGAGGACACAACTATGAAAAGACTTTCAGAGATGGAGAATGCTTTAAGAAAGGCCAGCAGTCAAGTGGACCGTGCCAATGCATCAGTGAGAAGACTTGAGACTGAAAATGCTGAAATCAAAGCAGAGATGGAGGCTTCTAAATTGAGTGCATCAGAGTCAGTCACGGCTTGCTTGCAAGTTGCAAAAAGGGAGAAAAAGTGCTTAAAGAGGCTTCTAGCTTGGGAAAAACAGAAAGCTAAGCTACAGCAGGAGATTTCTGATGAAAAGGATAAGATATTGGAAATTCAAGAAGTATTGGGTCAGATTAAAGAAAGTCAGAAAGAAGCTGAGATAAAGTGGAGGGAGGAGTTGAAGGCTAAAGAGGAAGCCTTAATGCTAGCTGAGGAGGAAAGGCGCTCTAAGGAAGAAGCTGAGGCTAATAATAAGAGGAAGCTGGAGGCTTTGCGCTTGAAGATAGAGATAGATTTCCAGCGCCACAAGGATGACCTCCTAAGACTTGAGCAGGAACTTTCCCGCCTTAAAGCATCCACTCTGCCTGCTGAGTTGCATCACCAATCAAATACTTCGCATACTAGTGAGTGTGAGGGTACAACGGCCCAAAGAGAGGCAATTGCTAGGCTGCTTCAAGAATTAGATAAGCTGGAGGATTTCTCTGAGAAAGAAAACTGTGATAGGGAATGCGTTATGTGTATGAAAGATGAAGTTTCTGTCATTTTCTTGCCGTGTGCACACCAAGTTATGTGTGCTAATTGCAGTGATGAATATGGGAGAAATGGCAAATCTACTTGTCCTTGTTGCCGGGTTTCAATCGAACAGATGATCCGTGTATTTGGGGCAAGTTCCTAG 2169 0.4325 MGCSVREKHTRSNPKPRSVKSDTEDWCIDSFLISKSILESGLMPLKCHMGLNDSTQNPNPNLNPDLNPTPNVDDSGWGYCTEEQLEEILLKNLEFLYNEAVSKLVALGYKEEIALKALLRNGHCYGGMDVLTNILHNSLAYLNSNCSGGNTSNGNLDESEPVFTDLRQLEEYYLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRANSMEIPVLSASGDDSPTSTTVETVSNSVGLMAPALCRFHGGWGFANGGASDFPANGLISYGTDMALQRDIEFPKRFNLSPSMKSLLKRNVAVFAAGLRANSEQLQSQAKACPSNGTLSILDSPAILGTEIPVEQSMDSQNLNNQDAVNSVLSKFRDLNLDENLESVAEDHKDEVIFTLFHQIKDLEKQSKERKDWAHQKAMQAARKLSRDLTELKMLRMEREETQRLKKGKQTLEDTTMKRLSEMENALRKASSQVDRANASVRRLETENAEIKAEMEASKLSASESVTACLQVAKREKKCLKRLLAWEKQKAKLQQEISDEKDKILEIQEVLGQIKESQKEAEIKWREELKAKEEALMLAEEERRSKEEAEANNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASTLPAELHHQSNTSHTSECEGTTAQREAIARLLQELDKLEDFSEKENCDRECVMCMKDEVSVIFLPCAHQVMCANCSDEYGRNGKSTCPCCRVSIEQMIRVFGASS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1291 722 PANTHER OS05G0141500 PROTEIN 1 717 IPR046934 -
Bisa11g1291 722 Pfam Zinc finger, C3HC4 type (RING finger) 665 714 - -
Bisa11g1291 722 MobiDBLite consensus disorder prediction 1 22 - -
Bisa11g1291 722 Coils Coil 512 539 - -
Bisa11g1291 722 Coils Coil 449 490 - -
Bisa11g1291 722 CDD RING-HC_MIP1-like 665 717 - -
Bisa11g1291 722 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 643 719 IPR013083 -
Bisa11g1291 722 Pfam Family of unknown function (DUF6592) 92 208 IPR046527 -
Bisa11g1291 722 SUPERFAMILY RING/U-box 649 714 - -
Bisa11g1291 722 Coils Coil 551 588 - -
Bisa11g1291 722 Coils Coil 597 617 - -
Bisa11g1291 722 ProSiteProfiles Zinc finger RING-type profile. 668 708 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1291 Bisa-ChrBisa11 31985932 31988935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1291 649 718 C3H Transcription Factor Family AT1G73950 37.333 1.03e-07 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1291 11 31985932 31988935 Bisa01g2179 01 38959238 38963173 CCT