Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1289 ATGGGAGGGGCATCACTGCCTCCAGGTTTCAGATTCCACCCAACTGATGAAGAATTGGTGGGATATTACCTGAAAAGGAAAGTGGAGGGGCTTCAAATTGAGCTTGAAGTTATCCCTGTCATCGATTTGTACAAATTCGATCCCTGGGAGTTGCCTGAGAAATCGTTCCTGCCAAAGAGAGATATGGAGTGGTTCTTCTTCTGTCCCCGTGACCGAAAGTACCCAAATGGATCAAGAACAAACAGAGCCACCAGAGCTGGGTACTGGAAAGCCACTGGAAAAGACAGGAAGGTTCAGTGTCACTCTTCTCCTTCCTCTGTCACTGGTTACAGAAAGACCCTGGTTTTCTATCGTGGAAGAGCTCCTTTAGGAGATCGCACTGACTGGGTTATGCATGAGTATCGCCTCTGTGATGATTCTGCCCAAGGATCACCAAGCTTTCAGGGTGCCTATGCTTTGTGCCGAGTTATAAAGAAGAATGAGAAGGCAAATGATTCCAAGGGCAAAAAGGCTGGAAACAGTTGTGCTGATGGGAGTGACACGTCGATGAGAATCTCTAATGATGTTTCTTCCCAAACAAGTCACCTGCACAATGAGAGTGGTTATTCAAGCAATACTACTTCTCCATGCAATGTGGTTCAAACGGCAGAGTTTGAGAATCCTTCTGACATCTGGATCTCTCCGGATTTTATTCTTGATTCTTCAAAGGACTACCCTCAAGTGCAAGATGCAGTGTCTGAATACTTTCCGGTACAGTATGAGATATCAAGCTCCATGACACCATGGCAGCCATTGGAGCATTCAGAAATTTCACCCAGTTCATCCTACTCAAATTTCAATGGGGAGATTGAATTTGCTGATGATCTTAATCGAATTGGCTGCATGTCACCCTACATGAACTTGTACGGAAATGACCATGTGTTCTATCAAAGTTTTGATCAGATCAATTCAATGACATATCCAACACATTTCTGA 975 0.4441 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLQIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATRAGYWKATGKDRKVQCHSSPSSVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDSAQGSPSFQGAYALCRVIKKNEKANDSKGKKAGNSCADGSDTSMRISNDVSSQTSHLHNESGYSSNTTSPCNVVQTAEFENPSDIWISPDFILDSSKDYPQVQDAVSEYFPVQYEISSSMTPWQPLEHSEISPSSSYSNFNGEIEFADDLNRIGCMSPYMNLYGNDHVFYQSFDQINSMTYPTHF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1289 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 205 - -
Bisa11g1289 324 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Bisa11g1289 324 FunFam Nac domain-containing protein 86 15 162 - -
Bisa11g1289 324 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Bisa11g1289 324 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Bisa11g1289 324 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1289 Bisa-ChrBisa11 31978381 31979819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1289 1 284 NAC Transcription Factor Family AT4G17980 58.983 1.04e-111 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa11g1289 NAM 2.5e-39 No_clan