Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1267 ATGGCAGAGAAATTGGCCCCAGAAAAGCATCACGATTTCATCCACAAAGGTCAAAAGGTGTTCGAGTGGAATCAAACCCTGGACGAGGTGAATATTTATATAAACCTGCCTCCTAAAGTTAATACGAAGCAATTCTATTACAAGATTCAGTCGAAGCACGTCGAAGCTGGCATCAAAGGCAACCCTCCCTATCTCAATCACGATCTTACTTGCCCAGTGAAGATGGATTCTTCTTTCTGGACAATAGAGGATGATATAATGCATATTACATTGCAGAAGAGAGACAAAGGTCAGACATGGGCTTCTCCAATATTAGGTCAGGGTCAGTTGGATCCTTACACCACTGATCAAGAACAGAAGCGCCTCATGCTTCAGAGATTTCAGGAAGAGTTTGTGTCCCTTGAGCACAAAGTATAATTTTGGGAACGATACCGTATATATGTGAATGGACCAAATACAGCTCCAGTGTACCAGTTTCTGAAATCAAGTGCTGGGGGCTTTCTGGGTGATGTTATGAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGACCAAAACCTGAGGGCACGAAGAGGCATTTTCTTCTCACAGAAGGGGCTGAGAACGATGCCAAACCAGCTATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTCCCAAAGGGACTTAGGGTTCTTCTTCTTGATAGGGACACCACTTCTGCTGCCGGTATAAGAGAAAAGCTTGAAGCCATGGACTATATTGTCTCTATATTCTGCAACGAGGATGAAGCGTTGTCAGCAATCTCAAGTAAACCTGAAGGCTTCCATGTTGCCATAGTGGAGGTTAGCACAAGCAATAGCCAGGGATGTTTCAAATTTCTTGAAAATGCCAAGGACTTGCCAACCATTATGACTTCAAACAATCATTGCCTCAGCACCATGATGAAGTGCATAGCACTTGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCCGAGGACAAGCTCAGGAATATTTGGCAGCATGTGGTTCACAAGGCATTCAATGCTGGGGCAAGTATCCTGTCCGAATCACTAAAACCCGTCAAAGAATCCATAGTATCAATGTTGCAGCTCCAAACAGACAATAGGGAACATGAAAGTAAACTGTCAATAGATATAGATGAGGTATTGAAGCTTAGTGATAATGAACATGAACATTCAGCTGGAAGTTATAGTAAATACCCAGCTCCTTCAACTCCACAATTAAAGCAGGGGGCTAGGTTACTGGATGATGGAGATTGCCATGAACAGACTAATTGCTTGACTGAAAAAGAAAGCGGAGAACATGACATGGAATCTAAATCTGTCGAAACTACATATGGGAACTTGAACTCTGAAGGTACTACACAACCAAAGAAACCTGAAAAGACTGCAATGAAAAATAAAGAGGACTTTGCCAATGGTTCGATGAGCGAGAGTGATGTTTCTCCACATCTGCATAATGGAAAGTCTCTCAGTAACATTGATGATAGTACTGCATCTCCAAAAAGAGCAGTTGTTCTTAGTGATACATGTAAGGTCAAAACTAATCGGAAAAACTCAAAGAAGATGAAGGTAGACTGGACACCTGAGCTGCACAAAAAATTTGTGCAGGCAGTGGAACAACTAGGCATTGATCAAGCCATACCTTCTCGAATACTGGAGCTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAATATAGAATGCATAGGAGACATATCTTGCCTAAGGAAGAAGATCAAAGATGGCCACATCAAAGAGATATGATGCAAAGGAGCTATTATGCACCAAGACCAATTATGGGCATCCCTCCTTATCATTCTAATCACACGCTATCTCCAGCTCCTATGTATCCTATGTGGGGACAACCAGGAAGTCAACCGGCTGGAGTACAGATGTGGGGCCCGCCAGACTGTCACCTATGGCAGTCTACAGAAAGCTGGCATTGGAAGCCTTTTCCAGGGATGCATGCAGAAGCATGGGGTTGCCCGGTGTTGCCACCTCCTCAAAATCCTTGTTTTTCCTACAATCAACATATGCCTGGATTGCAAAACGCTAGTAAAGTTGACTACAGCTCTAGCATGCCAAAAACTTCCTTTGAGCATCATCCGGCAGATGAGGTTGTTGACAAAGTGGTGAAGGAGGCGATGAGCAAGCCATGGCTTCCTCTGCCATTAGGCCTTAAACCTCCATCCACAGATAGTGTATTGGCTGAGCTATCCAGGCAAGGCATCTCCACCATCCCTCATGGAACCAAGGGTTGTAAAGCTGAACCCAGCTGA 2313 0.4367 MAEKLAPEKHHDFIHKGQKVFEWNQTLDEVNIYINLPPKVNTKQFYYKIQSKHVEAGIKGNPPYLNHDLTCPVKMDSSFWTIEDDIMHITLQKRDKGQTWASPILGQGQLDPYTTDQEQKRLMLQRFQEEFVSLEHKVXFWERYRIYVNGPNTAPVYQFLKSSAGGFLGDVMKWNFEKFLVDKNGPKPEGTKRHFLLTEGAENDAKPAMVCTANDLQGWKDFPKGLRVLLLDRDTTSAAGIREKLEAMDYIVSIFCNEDEALSAISSKPEGFHVAIVEVSTSNSQGCFKFLENAKDLPTIMTSNNHCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGASILSESLKPVKESIVSMLQLQTDNREHESKLSIDIDEVLKLSDNEHEHSAGSYSKYPAPSTPQLKQGARLLDDGDCHEQTNCLTEKESGEHDMESKSVETTYGNLNSEGTTQPKKPEKTAMKNKEDFANGSMSESDVSPHLHNGKSLSNIDDSTASPKRAVVLSDTCKVKTNRKNSKKMKVDWTPELHKKFVQAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKEEDQRWPHQRDMMQRSYYAPRPIMGIPPYHSNHTLSPAPMYPMWGQPGSQPAGVQMWGPPDCHLWQSTESWHWKPFPGMHAEAWGCPVLPPPQNPCFSYNQHMPGLQNASKVDYSSSMPKTSFEHHPADEVVDKVVKEAMSKPWLPLPLGLKPPSTDSVLAELSRQGISTIPHGTKGCKAEPS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1267 770 Pfam Response regulator receiver domain 228 335 IPR001789 GO:0000160
Bisa11g1267 770 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 523 582 IPR017930 -
Bisa11g1267 770 CDD p23_NUDC_like 21 104 - -
Bisa11g1267 770 FunFam Two-component response regulator-like APRR2 225 351 - -
Bisa11g1267 770 MobiDBLite consensus disorder prediction 390 501 - -
Bisa11g1267 770 SUPERFAMILY Homeodomain-like 525 583 IPR009057 -
Bisa11g1267 770 Pfam Myb-like DNA-binding domain 529 578 IPR001005 -
Bisa11g1267 770 Pfam CS domain 21 93 IPR007052 -
Bisa11g1267 770 ProSiteProfiles Response regulatory domain profile. 227 340 IPR001789 GO:0000160
Bisa11g1267 770 MobiDBLite consensus disorder prediction 418 445 - -
Bisa11g1267 770 MobiDBLite consensus disorder prediction 474 501 - -
Bisa11g1267 770 Gene3D - 226 348 - -
Bisa11g1267 770 NCBIfam myb-like DNA-binding domain, SHAQKYF class 526 580 IPR006447 GO:0003677
Bisa11g1267 770 PANTHER TRANSCRIPTION ACTIVATOR GLK1 209 760 IPR044825 GO:0003700|GO:0045893
Bisa11g1267 770 Gene3D - 523 584 - -
Bisa11g1267 770 FunFam Two-component response regulator 522 585 - -
Bisa11g1267 770 ProSiteProfiles Glutathione peroxidase profile. 128 185 IPR000889 GO:0004602|GO:0006979
Bisa11g1267 770 Gene3D Glutaredoxin 111 192 - -
Bisa11g1267 770 FunFam nudC domain-containing protein 2 16 102 - -
Bisa11g1267 770 Gene3D - 8 110 IPR008978 -
Bisa11g1267 770 MobiDBLite consensus disorder prediction 446 462 - -
Bisa11g1267 770 SUPERFAMILY CheY-like 224 342 IPR011006 -
Bisa11g1267 770 ProSiteProfiles CS domain profile. 16 104 IPR007052 -
Bisa11g1267 770 SUPERFAMILY Thioredoxin-like 130 185 IPR036249 -
Bisa11g1267 770 SUPERFAMILY HSP20-like chaperones 14 118 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1267 Bisa-ChrBisa11 31663051 31679205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1267 209 759 Response Regulator Gene Family AT4G18020 49.743 7.61e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa11g1267 Response_reg 1.2e-07 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1267 11 31663051 31679205 Bisa01g2192 01 39258007 39262546 CCT