Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1238 ATGGTTAATAAAATGAATTGTTTCTTCTTCAAAGGGAAAAAGGGTTCAAAACCCGTTCCAGAATCGCAAAACGAAAGCAAGAAGAAAAATCAGGGGTTGAATCGCGCAGTGAGGTCAACGAGTTCGCTGCCATCGCCAAGAACCATAGCAGAGTTGTACAAAGAAAAAGAGCACAATTTAAGAGTTTTCACTTTGCAAGAGCTTAAGGAGGCGACAAATGCTTTCAATAGGATGCTGAAGATTGGAGAAGGGGGTTTTGGGAGCGTGTATAAAGGTACAATCAAGCCTCAAGATGGTCGTGGTGATCCTGTTGTAGTTGCGATAAAATGCCTCAACACTCGTGGCTTTCAGGGGCATAAACAATGGCTCGCAGAAGTCAAATTTCTGGGCATTGTTAATCACCCAAATTTAGTAAAACTATTGGGATACTGCTCCGAAGATGGAGAAAGAGGAATCGAACGGCTTTTGGTGTATGAGTTCATGCCCAATAGGAGCCTGGAAGATCATCTCTTCAGACGGGCTTATCCCTCCTTACACTGGAAAACAAGATTGCAAATCATGCTCGGTGCTGCCCGAGGATTAGCTTATCTACATGAAGGGTTGGAGGTTCAGGTGATATACCGAGATTTCAAATGTTCAAATGTTTTACTGAACGCGGATTTCCATCCAAAGCTTTCAGATTTTGGTCTAGCTAGGGAAGGTCCAATAGGTGATCAGACTCATGTATCCACTGCGGTGGTTGGGACTTATGGATATGCTGCCCCAGAATACATTGAAACGGGCCACCTCAAAGTTCAGAGTGACATATGGAGTTTTGGTGTGGTACTGTATGAGATGCTGACAGGGAGACAGGCATTGGATAGAAGACGTCCAAGAGAAGAAAAGCTTCTAGATTGGGTTAAACAGTACCCTGCTGATAGTAGGAGGTTCAGCATGATAATGGACCCTCGACTAAGAAATGAATATTCACCTGGTGCTGCTCGGAAAGTGGCCAAGTTGGCAGACAGCTGCTTGAACAAGAAGCCCGAAGAAAGGCCATCCATGAGTCAGGTAGTGGAAAGCTTGAAGCAAGCATTGCAGTATTCAGAAACGTCAGACGTGGCTTCTGGATCATCTCGATCTAAATTGCTCCCGAAAAGAAAATAG 1146 0.4442 MVNKMNCFFFKGKKGSKPVPESQNESKKKNQGLNRAVRSTSSLPSPRTIAELYKEKEHNLRVFTLQELKEATNAFNRMLKIGEGGFGSVYKGTIKPQDGRGDPVVVAIKCLNTRGFQGHKQWLAEVKFLGIVNHPNLVKLLGYCSEDGERGIERLLVYEFMPNRSLEDHLFRRAYPSLHWKTRLQIMLGAARGLAYLHEGLEVQVIYRDFKCSNVLLNADFHPKLSDFGLAREGPIGDQTHVSTAVVGTYGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRQALDRRRPREEKLLDWVKQYPADSRRFSMIMDPRLRNEYSPGAARKVAKLADSCLNKKPEERPSMSQVVESLKQALQYSETSDVASGSSRSKLLPKRK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1238 381 ProSiteProfiles Protein kinase domain profile. 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1238 381 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Bisa11g1238 381 CDD STKc_IRAK 81 357 - -
Bisa11g1238 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bisa11g1238 381 PANTHER OS01G0588500 PROTEIN-RELATED 31 359 - -
Bisa11g1238 381 Gene3D Transferase(Phosphotransferase) domain 1 161 375 - -
Bisa11g1238 381 SUPERFAMILY Protein kinase-like (PK-like) 57 355 IPR011009 -
Bisa11g1238 381 MobiDBLite consensus disorder prediction 25 44 - -
Bisa11g1238 381 FunFam Serine/threonine-protein kinase BIK1 43 160 - -
Bisa11g1238 381 MobiDBLite consensus disorder prediction 13 44 - -
Bisa11g1238 381 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 161 369 - -
Bisa11g1238 381 Pfam Protein tyrosine and serine/threonine kinase 80 355 IPR001245 GO:0004672|GO:0006468
Bisa11g1238 381 MobiDBLite consensus disorder prediction 360 381 - -
Bisa11g1238 381 Gene3D Phosphorylase Kinase; domain 1 48 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1238 Bisa-ChrBisa11 31077018 31079294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1238 2 355 Glycoside Hydrolase AT3G07070 41.096 1.47e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa11g1238 PK_Tyr_Ser-Thr 1.1e-48 CL0016