Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1225 ATGGGTTGTTTGGTGATTCGCTATAAGTGTCTGATCTTGGAGGAGCTTCTGAGGGTGGACATGGAGGAACGGTATGAGCCTGTGAAAGACCTTGGTTCAGGGAATTTTGGAGTGGCTAGGTTGGTGAGAGATAAGAAGACGAAAGAGCTTGTTGCTGTCAAATACATAGAAAGGGGGAAAAAGATTGACGAGAAAGTTCAGAGGGAGATCATTAACCACCGATCATTGAGACATCCAAACATTATCAAGTTTAAAGAGGTCTTGCTGACCCCTACCCATTTAGCTATTGTCATGGAGTATGCTGCAGGTGGCGAACTCTTTGAGAGAATATGCAGTGCTGGTCGTTTCAGTGAAGACGAGGCGAGATTTTTCTTCCAGCAGCTAATATCTGGAGTTAGCTACTGTCACTCCATGGAAATATGCCACAGAGATCTGAAACTGGAAAACACACTCTTGGATGGAAGTCCAACGCCTCGACTTAAAATTTGCGACTTCGGTTACTCCAAGTCCGCTTTACTTCACTCTCAACCGAAATCAACAGTTGGAACTCCTGCTTACATAGCTCCAGAGGTTCTGTCGCGAAAGGAGTATGATGGAAAGATTGCGGACGTTTGGTCGTGTGGTGTAACACTTTATGTCATGTTAGTTGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACTATTGGAAGAATAATGAGCATTCAATACTCCATACCCGACTATGTACGCGTCTCTGCAGACTGCAGACATCTTCTTTCTCGCATCTTTGTTGCCAATCCTGCCAAGAGGATAACAATCCCAGAGATAAAGCAGCACCCTTGGTTTCTGAAGAACTTGCCAAAAGAGATAATTGAAGTTGAGAAGAAAAACTATGCGGAAGCACAAAAAGATCAACCAAGCCAGAGTGTGGAAGAGATAATGCGAATAGCACAAGAGGCAGGGACGCCTGGGCAAGGATCCAAGGGTGGAGGACAAGCCGGTGGAGAAGGGTCAATGGACGATGAGGATGTTGAGGCTGAAGATGAGGAATCGGAAGCTGAAGCTAGTGGTGACTATGCTACAACAACATAG 1089 0.4527 MGCLVIRYKCLILEELLRVDMEERYEPVKDLGSGNFGVARLVRDKKTKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPTPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMSIQYSIPDYVRVSADCRHLLSRIFVANPAKRITIPEIKQHPWFLKNLPKEIIEVEKKNYAEAQKDQPSQSVEEIMRIAQEAGTPGQGSKGGGQAGGEGSMDDEDVEAEDEESEAEASGDYATTT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1225 362 SMART serkin_6 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1225 362 MobiDBLite consensus disorder prediction 337 354 - -
Bisa11g1225 362 CDD STKc_SnRK2 24 280 - -
Bisa11g1225 362 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Bisa11g1225 362 SUPERFAMILY Protein kinase-like (PK-like) 17 293 IPR011009 -
Bisa11g1225 362 Gene3D Phosphorylase Kinase; domain 1 12 100 - -
Bisa11g1225 362 MobiDBLite consensus disorder prediction 299 362 - -
Bisa11g1225 362 FunFam Serine/threonine-protein kinase SRK2E 19 100 - -
Bisa11g1225 362 FunFam Serine/threonine-protein kinase SRK2E 101 289 - -
Bisa11g1225 362 Gene3D Transferase(Phosphotransferase) domain 1 101 289 - -
Bisa11g1225 362 Pfam Protein kinase domain 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1225 362 ProSiteProfiles Protein kinase domain profile. 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1225 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Bisa11g1225 362 PANTHER SERINE/THREONINE KINASE 23 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1225 Bisa-ChrBisa11 30898894 30903884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1225 24 307 CBL-interacting serine-threonine protein kinases AT4G24400 42.034 1.91e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Bisa11g1225 Pkinase 1.2e-71 CL0016