Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1213 ATGGAACTTCATTCTAAACACCAACTTGGCCTTCTCTGTGTCATCCTCCTCTTACCTGCACTCTGTACCTCCCAAGACTTCACTTCCTCCAGAGCCACCTATTATGGTAGCCCTGATTGCTATGGAAACCCAAGAGGAGCTTGTGGATTTGGTGAATATGGAAGAACTGTGAACGATGGCAGTGTTGCAGGCGTGGCTGCCCTTTGGAAAAATGGCTCTGGATGTGGTGCTTGCTACCAAGTGAGGTGCAAGATTCCGGAATACTGTGATGAGTATGGATCATACGTGGTGGTGACAGACTTTGGAATAGGGGACAGAACAGACTTCGTGATGAGTCCACGTGGCTACTCCAGACTGGGACGCAATCCAGACGCATCTGCGGAGCTCTTCAAATACGGCGTCGTCGAGGTGGAGTACAGAAGAATCCCCTGCAGATACAAGGGCTACAACATCTTCTTCAAGGTCCACGAGCACAGCAAGTTCCCTGACTACATCGCCGTCGCCATCCTCTACGTCGGAGGACAATACGACGTCACTGCTGTAGAGTTGTGGCAGGAGGATTGCCAAGAGTGGAGGGGGATGAGAAGGGCGTTTGGGGCAGTGTTTGACACACCAAATCCGCCAAGTGGAGAGATAAACTTGAGGTTCCAAGTGAGTGGGAGTGCAGGGGTTTACTGGGTTCAGTCCAAGAACTCTATTCCCAGTAATTGGGAGGCTGGAGCTGCTTATGACACTGATATTCAGCTTGATTGA 753 0.5073 MELHSKHQLGLLCVILLLPALCTSQDFTSSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAGVAALWKNGSGCGACYQVRCKIPEYCDEYGSYVVVTDFGIGDRTDFVMSPRGYSRLGRNPDASAELFKYGVVEVEYRRIPCRYKGYNIFFKVHEHSKFPDYIAVAILYVGGQYDVTAVELWQEDCQEWRGMRRAFGAVFDTPNPPSGEINLRFQVSGSAGVYWVQSKNSIPSNWEAGAAYDTDIQLD 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1213 250 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Bisa11g1213 250 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bisa11g1213 250 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Bisa11g1213 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bisa11g1213 250 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Bisa11g1213 250 SUPERFAMILY PHL pollen allergen 150 244 IPR036749 -
Bisa11g1213 250 PANTHER EXPANSIN-B3 17 248 - -
Bisa11g1213 250 CDD DPBB_EXLB_N 28 144 - -
Bisa11g1213 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 245 IPR007117 -
Bisa11g1213 250 Gene3D - 19 144 IPR036908 -
Bisa11g1213 250 Pfam Expansin C-terminal domain 151 234 IPR007117 -
Bisa11g1213 250 Gene3D - 145 246 IPR036749 -
Bisa11g1213 250 SUPERFAMILY Barwin-like endoglucanases 13 148 IPR036908 -
Bisa11g1213 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Bisa11g1213 250 Pfam Lytic transglycolase 62 139 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1213 Bisa-ChrBisa11 30691924 30693380 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1213 3 249 Expansin Gene Family AT4G17030 60.400 1.82e-112 322