Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1208 ATGGAACGTCATTGTAAACACCAACTTGGCCTTTTTTGTGTCATGCTTCTCTCACTTGCACCATGCACCTCCCAAGACTTCACGCCTTCCAGAGCAACCTATTATGGTAGCCCAGATTGTTATGGAACTCCAAGGGGGGCTTGTGGATATGGCGAATATGGAAGGATAGTGAACGATGGCAGTGTTTCAGGCGTTTCTGGGCTTTGGAGGAATGGCTCTGGATGTGGTGGTTGCTACCAAGTGAGGTGCAAGAATCCACAATACTGCGACGACTATGGGTCTTACGTAGTGGCAACAGACTACGGAGAAGGAGACAGAACGGACTTCGTGATGAGTCCACGTGCCTACTCCCGACTTGGACGCAATCCAGACGCATCCGCACAGCTCTTCAAATACGGCGTCGTTGATGTCGAATTCAGAAGAATTTCTTGCAATTACAACAGCGTCAACATCATCATCAGGATCCACGAGAACAGCAGATACCCTGACTACTTAGCTATCGTCGTTCTCTACGTAGGTGGACAATTCGACGTCACTTCCGTTGAGATGTGGCAGGAAGATCGTCGAGAATGGAAGCCAATGAGAAGAGCCTTTGGAGCAGTGTTTGACTCAATGTACCCAAGTGGACCGATCTTCGTGAGGCTTCGAGTGATTGGGACAGCAGGGGATTACTGGGCCGAGTCCAAGAATGCTATTCCTAATGATTGGAAGGTTGGAGATGCTTATGACACACAGATTCAGCTCCATTAA 750 0.488 MERHCKHQLGLFCVMLLSLAPCTSQDFTPSRATYYGSPDCYGTPRGACGYGEYGRIVNDGSVSGVSGLWRNGSGCGGCYQVRCKNPQYCDDYGSYVVATDYGEGDRTDFVMSPRAYSRLGRNPDASAQLFKYGVVDVEFRRISCNYNSVNIIIRIHENSRYPDYLAIVVLYVGGQFDVTSVEMWQEDRREWKPMRRAFGAVFDSMYPSGPIFVRLRVIGTAGDYWAESKNAIPNDWKVGDAYDTQIQLH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1208 249 Gene3D - 145 245 IPR036749 -
Bisa11g1208 249 SUPERFAMILY Barwin-like endoglucanases 13 147 IPR036908 -
Bisa11g1208 249 SUPERFAMILY PHL pollen allergen 150 243 IPR036749 -
Bisa11g1208 249 PANTHER EXPANSIN-B3 17 247 - -
Bisa11g1208 249 Gene3D - 17 144 IPR036908 -
Bisa11g1208 249 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Bisa11g1208 249 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bisa11g1208 249 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Bisa11g1208 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bisa11g1208 249 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Bisa11g1208 249 Pfam Lytic transglycolase 63 138 IPR009009 -
Bisa11g1208 249 PRINTS Major pollen allergen Lol pI signature 83 93 IPR005795 GO:0005576|GO:0019953
Bisa11g1208 249 PRINTS Major pollen allergen Lol pI signature 170 185 IPR005795 GO:0005576|GO:0019953
Bisa11g1208 249 PRINTS Major pollen allergen Lol pI signature 220 237 IPR005795 GO:0005576|GO:0019953
Bisa11g1208 249 PRINTS Major pollen allergen Lol pI signature 63 74 IPR005795 GO:0005576|GO:0019953
Bisa11g1208 249 PRINTS Major pollen allergen Lol pI signature 154 169 IPR005795 GO:0005576|GO:0019953
Bisa11g1208 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Bisa11g1208 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 244 IPR007117 -
Bisa11g1208 249 CDD DPBB_EXLB_N 30 144 - -
Bisa11g1208 249 Pfam Expansin C-terminal domain 153 233 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1208 Bisa-ChrBisa11 30630467 30632274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1208 6 248 Expansin Gene Family AT4G17030 56.275 1.55e-94 276