Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1206 ATGGGGGTTGTGGGGACTATGCTGCAATTAAAGTCAATAAACATGGTTGTATCAATCAATAACAACAATAATGAAGGAAGATTTAGGGGCTTATTGATGGAAAATGGGGATTGCTCTTTTCTTCCACAGCCCATGTGTAAACGGCGAAAAGTGTCTGCCATTCGTGATTTTCCAGCAGGCTGTGGACGGTTTGTGCCCAGAATTGATTTAACGCCAAATGTAGATACTGCTAGTTTTGGTATTGAGAAAGGTACAATTCTTGAGGATAAGAGTGGTGAAGATTTAAGGGATGAATCTCCTTTAACAAATGATGAACCCACAAAAATGCAGTCAGTAGGGTTGGATGATTTGGAGGATTCAAAATTGACAAGAACTGCAGAAGTTGAAAAGTGTGATGATTCATCTAATATGTCAAAAGACTTGCATAAAATGGGCCTTTCTTCTCCAAAGGGTAAGGTGGTTTTGTCAGGTAGTTCAAAATTCTTGTCACCTGATGCCAGTATATCTGGTTCTAGCAACTGCTTGGAGAAGGCTGTAACTAGAAGGCATTTTCCTCAAAGACGAGTTTCAGCCATCAGAGACTTTCCTCCTTTATGTGGACGAAATGCTCCACTCCTCAGTAAGGATGAGTGTTTAGAGGGAATCTCTTTTCCGGATAACAAGAGTATTGGTCAACAGAATTTGGCTGTAGATGACAAGGAACTGAAAAAGGTAGCAGCCTCTTATGTAAAGCAATTAGAAAATAATGTTGAACATGGAGATGCTTGCAATACAGTGGACGTAGTCCAAGGTGATTTTGATGGGAATGGTATAGATGAAGTGAAGAAGTTGGATGGACCATCTTCTAAGATGAAATTGCCCCCGGGAAATACAAGAGATGAGGGCATTGTACCTCCTAAGGAAAGCAATCACCATAAAGTCTTGATAAATTCCTCGACAATAGTTAAAGATGAAAGCAATGATGCTGTACAGGTTGATGGAATATCAGGAATGGGGATGGCAGTTTGTTCAGAAGCCCAAAGTCCTGGGGCAAAGCGTTTGGACATATCCAGTTGTCATCATAAGTTGAAAGGAGATCGTAATGGACTGCAGGCTTCATCTCGTAGGATAACTGTGCTAGGTCTGATGTCTGAATCGGAATGCCCTTGGAGGAATGGTAAAGGTTCTTCCAAATTTAATACGATTGGTGCTACAAATAAAAGCAAGGGAATGAAGCCTATAAAAGGAGATTGTAATACTAGTGATTTTTATGCTCGGTTTGACAGGTCTAAAGTTGCTACCAAGACTAAAGACTCACCAAATTTTTCTGGGAAGAAGCCTATAAAAAAGGAAAAAGGAACTTGTGCTTCTGAGGGTATGGGTCAACTAGTAGTTTGGGAAGAAAAAGATCCTCTTGACTCTGAGGAAAATATGGAAGCATTAAGTGTTGTCCCGATATCACAATGTTTTAATGTAAATGTTCCTCCTTTTGGTCACGATAATCTGAGTGGTGACAATGTCTCTAATGTGACCCGAAATAAAGTGAGGGAGACATTGCGCCTGTTTCAAGCTGTTTCTAGAAAGCTTCTGCAGGAGGAAGAAGCAAAGTTAAAAGACCGATCCAACACTTACAGGAGGATTGATTTACAAGCAGCTAAGATCCTTAAGGAGAAAGGGAAATATGTTAACACTGGGAAGCAGATCTTGGGACGTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTATAGGATAGAGCTTAATATAATTGGTCTTCATCGCCAGATTCAGGGTGGCATAGATTATGTGCTGCAGAATCGTAAGATCCTTGCAACTAGTATTGTTTCATCTGGGGGCTATGCTGATGAGTTGGATAATTCAGATGTCTTGATTTATACTGGTCAAGGGGGCAATGTGATAAAAAATGATAAAGATAAAGAACCTGAAGATCAGAAGCTTGAAAGGGGAAATCTTGCTTTGAAGAACAGTGTTGAGGAAAAGAATCCTGTTAGGGTGATACGTGGTTGTGAGTCAATGGATGGAAAATGCAAGAGATATGTTTATGATGGGTTGTATCAAGTTGAAGCATGTTGGCAGGATATGGGGCCACGTGGAAAGCTGATATTTAGGTTTCGACTGAAAAGAATCCCAGGTCAACCAGAACTTGCTTGGAAAGAAGTGAAGGAATGCAAAAAATTCAAAAAAAGAGAGGGTCTATGCGTTGATGATATTTCTGGTGGGAAAGAGCCAATTCCAATATGTGCTGTGAACACCATAGATGATGAAAAACCCCCACCATTTCAATACACAACTTCAATGATATATCCTAAATGCTACAACAATACTCTTTGGGATGGACTTTCAAACCTAATGCCTGAGACAAATTCAAGTTCTTGTGAAATTGTGGAGAATGTTGGCTTTACCATTGATGCTGCCGAGTATGGGCCTGCAAAGAGGGCTATTAATGGATCTTGTATACACTGTGACTTGTCTGCTCATTTTCCTACACGTATAAGACGAACCAGAATGTTTTGA 2514 0.4029 MGVVGTMLQLKSINMVVSINNNNNEGRFRGLLMENGDCSFLPQPMCKRRKVSAIRDFPAGCGRFVPRIDLTPNVDTASFGIEKGTILEDKSGEDLRDESPLTNDEPTKMQSVGLDDLEDSKLTRTAEVEKCDDSSNMSKDLHKMGLSSPKGKVVLSGSSKFLSPDASISGSSNCLEKAVTRRHFPQRRVSAIRDFPPLCGRNAPLLSKDECLEGISFPDNKSIGQQNLAVDDKELKKVAASYVKQLENNVEHGDACNTVDVVQGDFDGNGIDEVKKLDGPSSKMKLPPGNTRDEGIVPPKESNHHKVLINSSTIVKDESNDAVQVDGISGMGMAVCSEAQSPGAKRLDISSCHHKLKGDRNGLQASSRRITVLGLMSESECPWRNGKGSSKFNTIGATNKSKGMKPIKGDCNTSDFYARFDRSKVATKTKDSPNFSGKKPIKKEKGTCASEGMGQLVVWEEKDPLDSEENMEALSVVPISQCFNVNVPPFGHDNLSGDNVSNVTRNKVRETLRLFQAVSRKLLQEEEAKLKDRSNTYRRIDLQAAKILKEKGKYVNTGKQILGRVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYVLQNRKILATSIVSSGGYADELDNSDVLIYTGQGGNVIKNDKDKEPEDQKLERGNLALKNSVEEKNPVRVIRGCESMDGKCKRYVYDGLYQVEACWQDMGPRGKLIFRFRLKRIPGQPELAWKEVKECKKFKKREGLCVDDISGGKEPIPICAVNTIDDEKPPPFQYTTSMIYPKCYNNTLWDGLSNLMPETNSSSCEIVENVGFTIDAAEYGPAKRAINGSCIHCDLSAHFPTRIRRTRMF 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1206 837 Gene3D SET domain 730 797 IPR046341 -
Bisa11g1206 837 SUPERFAMILY SET domain 724 818 IPR046341 -
Bisa11g1206 837 SUPERFAMILY PUA domain-like 544 721 IPR015947 -
Bisa11g1206 837 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 340 772 - -
Bisa11g1206 837 MobiDBLite consensus disorder prediction 88 111 - -
Bisa11g1206 837 SMART G9a_1 558 712 IPR003105 -
Bisa11g1206 837 Pfam SAD/SRA domain 562 712 IPR003105 -
Bisa11g1206 837 MobiDBLite consensus disorder prediction 276 295 - -
Bisa11g1206 837 MobiDBLite consensus disorder prediction 88 103 - -
Bisa11g1206 837 Gene3D - 544 729 IPR036987 -
Bisa11g1206 837 ProSiteProfiles YDG domain profile. 563 708 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1206 Bisa-ChrBisa11 30552965 30558025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1206 478 772 Su(var)3-9 homologs AT5G04940 40.850 6.51e-55 199