Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1186 ATGCGTCAGTCTCCGTTGGAGTTCCCTATTACTAAATTAGTAATATTGGAAATCCCTTTTTCTCTGTGTCCTAAGGCAACATATCAAGTTGCACCTGCAGCATCCATGGCTATACCTATGTCCAAAATCTTCTTCCTCATTCTCCTCTTGCTTCCACCTAAATTTCATTCTGCAAATGTGACTTTGAACTTGACAATCTTCGCAAATGATCAGAATTCCTCATGGGTCTCATCTTCAGGGGAATTTGCTTTTGGGTTTCGCCCAATCAACAACACAAACCTCTTCCTAGTTGCCATCTGGTTCAACAACATTCCTGACAAAACCATTATTTGGAATACCAACACCTCAAGTCCTGTACTACCAGGATCACAGGTTCAGCTCACAGCCAAGGGTCTTAGCCTCACTAATCCTCAAGGTGAAGCCATATGGAAAGAACCCACAGAGCCACAAGAAAATGTGTCTTACGGAGCTATGCTTGACACTGGGAATTTCATCCTGGCATCATCTAATTCTTCTTACTTGTGGCAGAGTTTCAATAATCCCACTGACACACTTTTGCCAACCCAAACTTTGGATGTAAACTCCAAGCTCTATTCTCGATTGACGCAGACCAATTACACAAAGGGAAGGTTCGAGCTTTACTTTGAGAATGGAAATCTTCTTATGAGTCCTATTGGATGGCCAACTGAATCTCATTACACCAATTATTATAGTCATAACGCAACCAATGCTAGTAATAACGCTTTACAGCTAGTGTTCAATGAAACAGGGGATTTTTATTTAAAGACAGAGGGTGGAGGTCAAACAACACTTGAATGGAGCAATGCAAATTTTGATCTTAGCAGATATTACTACAGAGCCACACTTGAATACTATGGAGTTTTTACGTTGTATTCTTATCCAAAGGGATCCAGCAGCAATGAGGGTTGGTCAATTGAGAACATTGTTCCCAACAACATTTGCAATGACATATTCAGTGATTTGGGTGGCGGTTGTTGTGGGTACAATAGCTATTGTTCCATGGCAAATAGCAAGCCAAATTGTATGTGCCCAGAAGGGTATTCCAGGGTTGATCCTAACAACGAATATGGAGGATGCCAACCTGATCTTTCCCTTGGTTGTGGAGCTGATGATGCGACATCGCATGAAAAACCAGAGGAGTTATATGAGTTCAAGGTTCTAAATGATGTGGATTGGCCTTTGGGAGATTATGAAAGGTTGTATAATTTTACTCAAGATCAATGCCGAAATTCTTGCTTGTATGATTGTAATTGCGTTGTTGTCATTTTTGACAATAGTCATACTTGCTGGAAGAAGAAACTACCCCTTTCTAATGGAAGAGCAAACGTAGTTAATGGTCAGACGACCCTCATCAAAACAAGAATTCAACCACTGAGTAATCTTGGTCCTGCTGTGAATAAGGAAGATGGAGATTGTGTTAAGCCAGCTCTCTTAGGGTCACTTATTGGTTCCATTGTCATTAATACTTTACTTGTAGCCACTGTTGTTCTGATTCTTCTATTAAAGCCCAAAAAGACTACTCAAAGCTTGAGTCTTCTTGAGACAAATTTGCACTCCTTTACTTATGAAGCATTGGAGGAAGCAACACAGGGATTCAATGAAGAAGTAGGAAGGGGTTCTTTTGGCACTGTGTACAAAGGCAACCTCAAATCAGGAAGGGACAATTTTGTTGCGGTGAAGAGATTGGATAGATTGGCTCAAGAACGTGAAAAAGAGTTTAGGACAGAGTTGAGTGCCATTGGGAGAACATGCCACAAGAATCTGGTTCGACTGATTGGTTTTTGTGATGAGGGAGTTCATAGACTTCTAGTGTATGAGTTCATGAGCAATGGCACTTTAGCAGACGTCCTTTTTGGACAACCCAAACCCATTTGGAATTTGAGGGTTAGCTTTGCTTTGGGAATAGCAAGAGGGCTGCTTTACCTACACGAAGAGTGTGACACCCCCATCATTCATTGTGATATAAAACCTCAGAACATACTGGTAGATGAACATTTCATGGCAAAAATCTCAGACTTTGGGTTGGCCAAGTTGTTGTTTTCCAATCAAAGTCGAACCCGTACAGTGATAAGAGGAACAAGAGGGTATGTGGCACCGGAATGGTTCAAGAACGTGCCTGTAACTCCAAAAGTGGATGTTTATAGCTTTGGAGTGATGCTATTGGAGATAATTTGTTGTAGAAGAAGTGTGGTGTTGGATGTGGATAGTGAGGAGGAAGAGAAGGCAGTGTTAACAGATTGGGCTTATGACTGTTATGTGGAGAGGAGAATAGACAGTTTGGTGGAGAATGATGAGGAGGCAATGGAGGACAAAGGGAGGCTCGTAAAGTGGGTGATGACAGCAATGTGGTGCATTCAAGAGAATCATGAAAAAAGGCCTAATATGAAGACTGTGATACTAATGTTACAAGGACTTGTTGACATCCCACGTCCACCACTGCCATCATCCTTCATCTCAATTGCTTGA 2487 0.415 MRQSPLEFPITKLVILEIPFSLCPKATYQVAPAASMAIPMSKIFFLILLLLPPKFHSANVTLNLTIFANDQNSSWVSSSGEFAFGFRPINNTNLFLVAIWFNNIPDKTIIWNTNTSSPVLPGSQVQLTAKGLSLTNPQGEAIWKEPTEPQENVSYGAMLDTGNFILASSNSSYLWQSFNNPTDTLLPTQTLDVNSKLYSRLTQTNYTKGRFELYFENGNLLMSPIGWPTESHYTNYYSHNATNASNNALQLVFNETGDFYLKTEGGGQTTLEWSNANFDLSRYYYRATLEYYGVFTLYSYPKGSSSNEGWSIENIVPNNICNDIFSDLGGGCCGYNSYCSMANSKPNCMCPEGYSRVDPNNEYGGCQPDLSLGCGADDATSHEKPEELYEFKVLNDVDWPLGDYERLYNFTQDQCRNSCLYDCNCVVVIFDNSHTCWKKKLPLSNGRANVVNGQTTLIKTRIQPLSNLGPAVNKEDGDCVKPALLGSLIGSIVINTLLVATVVLILLLKPKKTTQSLSLLETNLHSFTYEALEEATQGFNEEVGRGSFGTVYKGNLKSGRDNFVAVKRLDRLAQEREKEFRTELSAIGRTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADVLFGQPKPIWNLRVSFALGIARGLLYLHEECDTPIIHCDIKPQNILVDEHFMAKISDFGLAKLLFSNQSRTRTVIRGTRGYVAPEWFKNVPVTPKVDVYSFGVMLLEIICCRRSVVLDVDSEEEEKAVLTDWAYDCYVERRIDSLVENDEEAMEDKGRLVKWVMTAMWCIQENHEKRPNMKTVILMLQGLVDIPRPPLPSSFISIA 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1186 828 ProSiteProfiles Protein kinase domain profile. 537 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1186 828 ProSitePatterns Protein kinases ATP-binding region signature. 543 567 IPR017441 GO:0005524
Bisa11g1186 828 CDD PAN_AP_plant 372 460 - -
Bisa11g1186 828 Pfam D-mannose binding lectin 108 196 IPR001480 -
Bisa11g1186 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 54 179 - -
Bisa11g1186 828 SUPERFAMILY Protein kinase-like (PK-like) 513 809 IPR011009 -
Bisa11g1186 828 PIRSF SRK 30 828 IPR024171 GO:0004674
Bisa11g1186 828 SMART serkin_6 539 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1186 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 222 IPR036426 -
Bisa11g1186 828 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 64 821 - -
Bisa11g1186 828 SMART blect_4 63 181 IPR001480 -
Bisa11g1186 828 Gene3D - 67 180 IPR036426 -
Bisa11g1186 828 Gene3D Phosphorylase Kinase; domain 1 503 614 - -
Bisa11g1186 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Bisa11g1186 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 615 817 - -
Bisa11g1186 828 Pfam Protein kinase domain 540 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1186 828 Gene3D - 182 314 IPR036426 -
Bisa11g1186 828 FunFam S-receptor-like serine/threonine-protein kinase 508 614 - -
Bisa11g1186 828 ProSiteProfiles Bulb-type lectin domain profile. 61 179 IPR001480 -
Bisa11g1186 828 FunFam Serine/threonine-protein kinase 182 324 - -
Bisa11g1186 828 Gene3D Transferase(Phosphotransferase) domain 1 615 816 - -
Bisa11g1186 828 CDD STKc_IRAK 543 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1186 Bisa-ChrBisa11 30254718 30257204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1186 523 826 Receptor kinase-like Gene Family AT1G60800 39.815 5.54e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa11g1186 Pkinase 1.2e-47 CL0016