Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1183 ATGGCTATGCCCATAATTATACCTCTACCTAACATCTTCTTCCTCCTTCTTCTCTTGCTTCCACCTAAATTCCATTCTGCAAACGTGACTTTGAACTCAACACTCTCCACAGATGATCAAAATTCCTCATGGGTCTCATCTTCAGGGGAATTTGCTTTTGGGTTTCTCCCAATCACCAACACAAATCTCTTCTTGCTCGCCATCTGGTTCGACAACATTCCTATCAAAACCATTGTTTGGAGTGCTAACACCTCAAGTCCTGTACCACGTGGATCTCATGTTCAGCTCACAGCAAAGGGTCTTACGCTCAACGATCCTGAAGGTGAAGCCTTATGGACAGTAGAGCCACAAGAAAATGTGTCTAATGGAGCTATGCTTGACACTGGGAATTTTGTTCTGGCAACCTCTGATTATTATCTGTGGGAAAGTTTCAATAATCCCACTGACACGCTCTTGCCAACCCAAACTTTAGATGTAAACTCTAGTCTTTATTCTCGATTGACACAGACCAACTACACAAAGGGGAGGTTTGAGCTTTACTTTGAGAATGGAAATCTTTTGATGTGTGAAACCGGGTGGCCAACTGAAACTCGTTACAGCAATTATTTTGGTATAAATGCAACCAATGCTAATGACACCACTTTACAGTTAGTTTTTAACAAAACAGGGGGTATATATGTAAAGATAGAAGGTGGCAGTCAAAAAGAACTCTGGGACAACCCAAATTTTGATTTTAGCACATATTACTGCAGAGCCACACTTGAATACTATGGAGTTTTTACTCTGTATTCTTATCCAAAGGGATCCAACAGTAACCAAGATTGGTCGATTGAGATCATTGTTCCGGATAACATTTGCACTGCCATATTTAGTGATTTTGGTGGCAGTAGTTGTGGGTACAATAGCAACTGTTCCATGGGAGTTCAGAGGCCAACATTTGGGTGCCCACCTGGGTATTCAAGGGTTGATCCTAACAACGAATTTGGAGGATGTCAGCCTGAAATTTCCCTTGGTTGTGGAGCTGATGATGAAGCATCACATGAAAATCCAGAAGAGGTATACAAATTTGAAGTTCAAACTGATGTGAATTGGCCACTGGGAGATTACGAAAAGATGGATAATTTTTCTAGAGATGAATGTGAAAGATCTTGCTTGTATGATTGTAATTGCGCTGCTGTGGTTTATAGCAATAGTAAAGCTTGCTGGAAGAAAAGACTACCTCTTTCTAATGGGAGACCAGAACCTGGTAATGGTCAGATGGTCCTCTTCAAAACAAGAATTCGGCCACTGAGTAATACTGAAGATGGAGATAGAGTTAATCCCACTCTCCTAGGGTCGCTTATTGGTTCCATTGTCATTAATACTCTACTTGTAGCCACGGTTATTTTGATTCTTTTGTTGAAGCCTAGAAAGAATATTCAAAGCTCGAGTAGAAAGAATATTCAAAGCTCGAGTAGAAAGAATATTCAAAGCTCGAGTTTTTTTGAAACAAATTTACACTCCTTTAATTATGACGCATTGAAGGAGGCAACACAAGGGTTCAGTGAAGAAGTAGGAAGGGGTTCCTTCGGAATAGTGTACAAAGGCAGCCTCAGATTAGGAAGCGACAATGTTGTTGCGATGAAGAGATTGGATAGATTGGCTCAAGAACGTGAGAAGGAATTTAGGACAGAGTTGAGTGCCATTGGAAGAACATGCCACAAAAATTTGGTTCGACTGATTAGTTTCTGTGACGAGGGTGTTCATAGACTTCTGGTGTATGAGTTCATGAGCAATGGTCTTGTTGATTTCCCAAGTCCACCGCCACCATCCTCTTTCAATTTACTCGCTTGA 1833 0.4097 MAMPIIIPLPNIFFLLLLLLPPKFHSANVTLNSTLSTDDQNSSWVSSSGEFAFGFLPITNTNLFLLAIWFDNIPIKTIVWSANTSSPVPRGSHVQLTAKGLTLNDPEGEALWTVEPQENVSNGAMLDTGNFVLATSDYYLWESFNNPTDTLLPTQTLDVNSSLYSRLTQTNYTKGRFELYFENGNLLMCETGWPTETRYSNYFGINATNANDTTLQLVFNKTGGIYVKIEGGSQKELWDNPNFDFSTYYCRATLEYYGVFTLYSYPKGSNSNQDWSIEIIVPDNICTAIFSDFGGSSCGYNSNCSMGVQRPTFGCPPGYSRVDPNNEFGGCQPEISLGCGADDEASHENPEEVYKFEVQTDVNWPLGDYEKMDNFSRDECERSCLYDCNCAAVVYSNSKACWKKRLPLSNGRPEPGNGQMVLFKTRIRPLSNTEDGDRVNPTLLGSLIGSIVINTLLVATVILILLLKPRKNIQSSSRKNIQSSSRKNIQSSSFFETNLHSFNYDALKEATQGFSEEVGRGSFGIVYKGSLRLGSDNVVAMKRLDRLAQEREKEFRTELSAIGRTCHKNLVRLISFCDEGVHRLLVYEFMSNGLVDFPSPPPPSSFNLLA 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1183 610 ProSiteProfiles Protein kinase domain profile. 512 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1183 610 Pfam PAN-like domain 360 403 IPR003609 -
Bisa11g1183 610 SMART blect_4 32 147 IPR001480 -
Bisa11g1183 610 Pfam Protein kinase domain 515 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1183 610 Gene3D Phosphorylase Kinase; domain 1 473 589 - -
Bisa11g1183 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 145 - -
Bisa11g1183 610 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Bisa11g1183 610 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 595 - -
Bisa11g1183 610 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 188 IPR036426 -
Bisa11g1183 610 SUPERFAMILY Protein kinase-like (PK-like) 486 596 IPR011009 -
Bisa11g1183 610 CDD PAN_AP_plant 337 419 - -
Bisa11g1183 610 ProSitePatterns Protein kinases ATP-binding region signature. 518 542 IPR017441 GO:0005524
Bisa11g1183 610 FunFam Serine/threonine-protein kinase 148 289 - -
Bisa11g1183 610 Gene3D - 147 272 IPR036426 -
Bisa11g1183 610 FunFam S-receptor-like serine/threonine-protein kinase 479 589 - -
Bisa11g1183 610 ProSiteProfiles PAN/Apple domain profile. 339 427 IPR003609 -
Bisa11g1183 610 Pfam D-mannose binding lectin 77 162 IPR001480 -
Bisa11g1183 610 Gene3D - 25 146 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1183 Bisa-ChrBisa11 30145195 30147606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1183 427 596 Receptor kinase-like Gene Family AT4G21410 37.989 3.84e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa11g1183 Pkinase 4.2e-11 CL0016