Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1182 ATGGCTATGCCTATACCTATACCTCTACCCAACATCTTCTTCCTCATTCTTCTCTTGCTTCCACCTAAATTTCATTCTGCAAACGTGACTTTAAACTCATCACTCTCCACAAATGATCAGAATTCCTCTTGGCTCTCATCTTCAAAGGAATTTGCTTTTGGGTTTCGCACAATCGACAACACAAATCTCTTCCTGCTTGCCATCTGGTTCGTCAACATTCCCAACAATAACATTGTTTGGAGTGCTAGCACCTCAAGCGATGTACCACGTGGATCTCAGGTTCAACTCACAGAAAAAGGTCTTACTCTCACTGATCCTCAAGGTGAAGCCTTATGGACAATAGAGGCACAGGAAAATGTGTCTTACGGAGCTATGCTTGACACTGGGAATTTTGTTCTGGCAACCTCTGATTCTTCTTATTTGTGGGAAAGTTTCAAAAATCCTACTGATACACTCTTGCCAACCCAAACTTTAAATGTAAACTCCAGTCTCTATTCTCGATTGACACAGACCAACTACACAAAGGGGAGGTTTGAGCTTTACTTTGAGAATGTAAATCTTCTGATGAGTGAAATCGGGTGGCCAAGTGAAACTCGGTACACCAATTATTTTAATATAAACACAACCAATGCTAATGACACTATTTTACAGCTAGTGTTTAACGAGACAGGGGGTATATATGTAAAGAGAGAGGGTGGTGATCAACAAGAACTTTGGGACAACCCAACTTTTGATTTTAGCACATATTACTACAGAGCCACACTTGAATACTATGGAGTTTTTACTTTGTATTCTTATCAAAAGGGATCCAACAACAATCAAGATTGGTCAATTGAGGTCTATGTTCCTGATAACATTTGCAATAGCATATTTAGTGATATGGGTGGCGGTTGTTGTGGGTACAATAGCAACTGTTCCATGGAAAATCAGATGCCAACATGTGGGTGCCCACCTGGGTATTCCAAGGTTGATCCTAACAACGAATTTGGAGGATGCCAGCCTGATATTTCTCTTGGTTGTGGAGCTGATGATAAAGCATCACATGAAGATCCAAAAGAGGTATACGAGTTTAAAGTTCAAACGGATGTGAATTGGCCACTGGGAGATTATGAAAGGATGGATAATTTTTCTCAAGATGAATGTCAAAACTCTTGCTTTTATGATTGTAATTGCATTGCTGTGGTGTATAGCAATACTAAAGTTTGTTGGAAGAAAAGACTACCTCTTTCTAATGGGAGACAAGAAGTCGGTAGTGGTCAGATGGTTCTCTTCAAAACAAGAATTCGGCCATTAAGTAACCTTGGTCCTGTTGTGAATAATATTGAAGATGGAGATGGAGTTAATCACGCTCTCTTAGGGTCACTTATTGGTTCCATTGTCATTAATGCTTTGCTTGTAGCCATAGTTATTTTGATTATTCTGTTAAAGTCTAGAAAGATTTTTCAAAGCTCGAGTCTTCTTGAAACAAATTTGCACTCCTTTAGTTATGAAGCATTAAAAGAGGCAACATTGGGGTTCAATGAAGAAGTAGGAAGGGGTTCCTTCGGAATTGTGTACAAGGGCAGCCTCAGATCAAGAAGCGACCATTTTGTTGCTGTGAAGAGATTGGATAGACTGGCTCAAGAACGGGAGAAGGAGTTTAGGACAGAGTTGAGCGCCATTGGAAGAACATGCCATAAGAATCTGGTTCGACTAATTGGTTTTTGTGATGAGGGAGTTCATAGACTTTTGGTGTATGAGTTCATGAGCAATGGCACTCTGGCAGACATCCTCTTTAGACAACCCAAACCCATTTGGAATTTAAGGGTTAACTTTGCTTTAGGGATAGCAAGAGGGCTGCTTTACCTACATGAAGAGTGTGACACCCCCATCATTCATTGTGATATAAAACCTCAAAACATATTGATAGATGAGCATTTCATGGCAAAAATCTCAGACTTTGGATTGGCCAAGTTGTTGTATTCCAATCAGAGCAGAACCCATACGATGATAAGAGGAACAAAAGGTTATGTGGCACCAGAATGGTTCAAGAACATGCCTGTGACTCTAAAAGTGGATGTTTACAGCTTTGGAGTGATGCTGTTGGAGATAATTTGCTGTAGAAGAAGTGTGATGATGGATGTGGATAATGGGGAGGAAGAGAAGGCAGTGCTAACTGATTGGGCTTATGATTGCTATATGGAAAGGAGAATAGAGCTTTTGGTGGAAAATGATAAGGGGGCATTGGAGGATAAAGGGAAGCTTGTGAAGTGGGTGATGACGGCAATATGGTGCATTCAAGAGAATTATGAGAAAAGGCCTAATATGAAGACAGTGATGCAAATGTTAGAAGGCCTTGTTGACGTCCCAAATCCACCATCACCATCCTCCTTCATCTGA 2379 0.4048 MAMPIPIPLPNIFFLILLLLPPKFHSANVTLNSSLSTNDQNSSWLSSSKEFAFGFRTIDNTNLFLLAIWFVNIPNNNIVWSASTSSDVPRGSQVQLTEKGLTLTDPQGEALWTIEAQENVSYGAMLDTGNFVLATSDSSYLWESFKNPTDTLLPTQTLNVNSSLYSRLTQTNYTKGRFELYFENVNLLMSEIGWPSETRYTNYFNINTTNANDTILQLVFNETGGIYVKREGGDQQELWDNPTFDFSTYYYRATLEYYGVFTLYSYQKGSNNNQDWSIEVYVPDNICNSIFSDMGGGCCGYNSNCSMENQMPTCGCPPGYSKVDPNNEFGGCQPDISLGCGADDKASHEDPKEVYEFKVQTDVNWPLGDYERMDNFSQDECQNSCFYDCNCIAVVYSNTKVCWKKRLPLSNGRQEVGSGQMVLFKTRIRPLSNLGPVVNNIEDGDGVNHALLGSLIGSIVINALLVAIVILIILLKSRKIFQSSSLLETNLHSFSYEALKEATLGFNEEVGRGSFGIVYKGSLRSRSDHFVAVKRLDRLAQEREKEFRTELSAIGRTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFRQPKPIWNLRVNFALGIARGLLYLHEECDTPIIHCDIKPQNILIDEHFMAKISDFGLAKLLYSNQSRTHTMIRGTKGYVAPEWFKNMPVTLKVDVYSFGVMLLEIICCRRSVMMDVDNGEEEKAVLTDWAYDCYMERRIELLVENDKGALEDKGKLVKWVMTAIWCIQENYEKRPNMKTVMQMLEGLVDVPNPPSPSSFI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1182 792 Gene3D Phosphorylase Kinase; domain 1 471 581 - -
Bisa11g1182 792 SMART serkin_6 504 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1182 792 CDD STKc_IRAK 510 779 - -
Bisa11g1182 792 SUPERFAMILY Protein kinase-like (PK-like) 487 777 IPR011009 -
Bisa11g1182 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Bisa11g1182 792 Pfam D-mannose binding lectin 78 163 IPR001480 -
Bisa11g1182 792 Gene3D - 150 274 IPR036426 -
Bisa11g1182 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 788 - -
Bisa11g1182 792 ProSitePatterns Protein kinases ATP-binding region signature. 510 534 IPR017441 GO:0005524
Bisa11g1182 792 PIRSF SRK 2 792 IPR024171 GO:0004674
Bisa11g1182 792 Gene3D Transferase(Phosphotransferase) domain 1 582 784 - -
Bisa11g1182 792 ProSiteProfiles Protein kinase domain profile. 504 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1182 792 Gene3D - 32 149 - -
Bisa11g1182 792 FunFam S-receptor-like serine/threonine-protein kinase 475 581 - -
Bisa11g1182 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 784 - -
Bisa11g1182 792 Pfam Protein kinase domain 507 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g1182 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 182 IPR036426 -
Bisa11g1182 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 146 - -
Bisa11g1182 792 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Bisa11g1182 792 SMART blect_4 32 148 IPR001480 -
Bisa11g1182 792 FunFam Serine/threonine-protein kinase 149 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1182 Bisa-ChrBisa11 30129664 30132042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1182 432 781 Receptor kinase-like Gene Family AT5G45780 37.978 2.06e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa11g1182 Pkinase 5.2e-48 CL0016