Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1181 ATGTTCGAATCTTCAATATCCTCTTCCCTCCCAATCTACAACGGCGACGCCATGTCCGAACAGAGTACCTACCACTCCGATTTAGCCATTTTGGAATCCGTTCGCCGCCACTTGCTGGGCGAATCCGACGCTGCTCCGATTACTTCATCGGGCAACACACCGGTCTCCAATTTCAGCAGCTTGTACCCATGCTTGAGCGACCGCTGGGGCGAATTGCCGCTCAAAGAGAACGATTCGCAGGACATGCTTCTCTACGGCGCGCTGCTCGACGGCCTCCACGTCGGATGGGTCCCATCCCTCGACGCAGGCGTCTCCTCCGATCTGCCATCCGCTATCACGGTGAAGTCGGAGCCTGATGTTCCGGCGCCGGAGAAGCCGAAGGCAAAGCATTACAGAGGCGTGCGTCAGAGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGTGACCCCGCCAAGAATGGGGCTCGGGTATGGCTGGGGACATTTGAGACGGCGGAGGACGCAGCCCTCGCTTACGATAGAGCTGCTTATAGGATGCGAGGCTCCCGTGCTCTGCTCAATTTCCCTCTCCGGGTTAATTCCGGCGAACCCGACCCGGTTAGAGTCGGAACGAAGCGCTCTTCTTCGGACAGTGGATCGAATCCGAAGCGGAAGAAGGTGGCTAGACCCGAAGTTGGAGGTGAAATGGAATCCTGTACACGTGGACAACACCTATTGGTCAGCTAA 723 0.5795 MFESSISSSLPIYNGDAMSEQSTYHSDLAILESVRRHLLGESDAAPITSSGNTPVSNFSSLYPCLSDRWGELPLKENDSQDMLLYGALLDGLHVGWVPSLDAGVSSDLPSAITVKSEPDVPAPEKPKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVGTKRSSSDSGSNPKRKKVARPEVGGEMESCTRGQHLLVS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1181 240 SMART rav1_2 130 194 IPR001471 GO:0003700|GO:0006355
Bisa11g1181 240 PRINTS Ethylene responsive element binding protein signature 154 170 IPR001471 GO:0003700|GO:0006355
Bisa11g1181 240 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Bisa11g1181 240 Pfam AP2 domain 130 180 IPR001471 GO:0003700|GO:0006355
Bisa11g1181 240 SUPERFAMILY DNA-binding domain 130 190 IPR016177 GO:0003677
Bisa11g1181 240 Gene3D AP2/ERF domain 129 191 IPR036955 GO:0003700|GO:0006355
Bisa11g1181 240 MobiDBLite consensus disorder prediction 192 240 - -
Bisa11g1181 240 MobiDBLite consensus disorder prediction 210 224 - -
Bisa11g1181 240 ProSiteProfiles AP2/ERF domain profile. 130 188 IPR001471 GO:0003700|GO:0006355
Bisa11g1181 240 FunFam Ethylene-responsive transcription factor 2 129 189 - -
Bisa11g1181 240 CDD AP2 129 188 IPR001471 GO:0003700|GO:0006355
Bisa11g1181 240 PANTHER DNA-BINDING DOMAIN 118 209 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1181 Bisa-ChrBisa11 30123270 30123992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1181 18 239 AP2-EREBP Transcription Factor Family AT4G17500 53.184 7.97e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g1181 AP2 9.1e-15 CL0081