Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1180 ATGCGATTACATTCCTTACTCTCATCACGAGCACTTTCTATTCAGGAAGCCGCAAAGAAACAGAGCACTAAAGACAAGAAAACGACTAAATTAAACGACAATAGAAAATGCGAAGCAAATCCAACAGTGGTTAGGTTTAGACCAGGGTCACTAGGATGCTCCTTGCCGCAGAGAAAAGAAACCGCTAGGAGTGTAATTGATAAGGAATTAGTGATGGCAAACCAGGTTGAGTTTTCAGCCCTCAATCGCATAAAATTGCATCTTCTAGGTGAACTATCTCCAGTGGAGACCTCCTCCACTGCCTCTGATACTCAAAGCCTTTGGTTTGAGGAAGCAAACCCATCTATTTCAAGCTCTCAATCTCTCTGTTCCCAATCTTCCAGTTCTGATTCTTGCTCCATGATGTCAGATTGCTTTGCTAACCTTCTCGACTTCCTAAACGATTCCATATCTTCATCCCAAAATCAGATTAATCTGTTTGAATACGAGTCAAAACCCCAAGTAATTGACCTCTCAACGCCTGAGTCCCAATTCGACAGCAATTCCCCCAAATTCGAAGCAAATTCACAGGCAAGCTCCCAGTCCAGCAGTTGCGTGTTGAAATTCGAACCAAGACCTCAATCACCGGAGAAAAAAGCAGCGTCGAGTCGGAAACCGTCGTTGCAAATCTCGCTTCCAAAGAAAACTGAATGGATCCAATTTGGAAATCCAGATCAGCAAGAGGAAATCGGAGAGATGTTGGTGCAGAACAATACAAAAGTCGAAGAGAAAAAGCACTATAGAGGAGTCCGACAGAGGCCCTGGGGGAAGTACGCGGCGGAGATCCGTGATCCGAACAAGCGAGGGTCAAGGGTGTGGCTGGGAACATTCGACACAGCCATCGAAGCCGCCAAAGCCTACGACCGAGCTGCTTTCAAGCTTCGCGGCTCCAAAGCCATCCTAAACTTCCCTCTGGAAATCGGTTCGAGCTCGTCCGTCAGCACCAGCGAGGGAAAACGACGCCGTGAAGATGAGGAGGAGGCGGCGCAAGTGGAAGTAAAGGCAGTGGCGAAGAAGCACAAAACGACGGAATCTGATGTCAACCGTATAACGGACATTCCGTTAACGCCGTCTTGCTGGACGGGATTCTGGGAAAACGACGTAAACGGGATATTCAGTGTCCCGCCGTTATCTCCCTTATCTCCGCACCATCCTTTAGGATATTCACAGCTTATGGTTGTATGA 1224 0.4747 MRLHSLLSSRALSIQEAAKKQSTKDKKTTKLNDNRKCEANPTVVRFRPGSLGCSLPQRKETARSVIDKELVMANQVEFSALNRIKLHLLGELSPVETSSTASDTQSLWFEEANPSISSSQSLCSQSSSSDSCSMMSDCFANLLDFLNDSISSSQNQINLFEYESKPQVIDLSTPESQFDSNSPKFEANSQASSQSSSCVLKFEPRPQSPEKKAASSRKPSLQISLPKKTEWIQFGNPDQQEEIGEMLVQNNTKVEEKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEIGSSSSVSTSEGKRRREDEEEAAQVEVKAVAKKHKTTESDVNRITDIPLTPSCWTGFWENDVNGIFSVPPLSPLSPHHPLGYSQLMVV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1180 407 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Bisa11g1180 407 PRINTS Ethylene responsive element binding protein signature 299 319 IPR001471 GO:0003700|GO:0006355
Bisa11g1180 407 SMART rav1_2 259 323 IPR001471 GO:0003700|GO:0006355
Bisa11g1180 407 SUPERFAMILY DNA-binding domain 259 319 IPR016177 GO:0003677
Bisa11g1180 407 MobiDBLite consensus disorder prediction 173 202 - -
Bisa11g1180 407 FunFam Ethylene-responsive transcription factor 2 258 319 - -
Bisa11g1180 407 ProSiteProfiles AP2/ERF domain profile. 259 317 IPR001471 GO:0003700|GO:0006355
Bisa11g1180 407 CDD AP2 258 317 IPR001471 GO:0003700|GO:0006355
Bisa11g1180 407 PANTHER DNA-BINDING DOMAIN 191 348 IPR044808 GO:0003700|GO:0009873
Bisa11g1180 407 Gene3D AP2/ERF domain 258 319 IPR036955 GO:0003700|GO:0006355
Bisa11g1180 407 Pfam AP2 domain 259 309 IPR001471 GO:0003700|GO:0006355
Bisa11g1180 407 MobiDBLite consensus disorder prediction 173 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1180 Bisa-ChrBisa11 30045663 30047163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1180 72 407 AP2-EREBP Transcription Factor Family AT5G47230 45.773 1.56e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g1180 AP2 6.8e-16 CL0081