Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1172 ATGCATATAGAGGAATTGAAGGGAGGAGAGGTGGAAGGAGGAGACGAAGGAAAACTATATGTCGGAAGTGGTGTTGTTGGCGGGACAAGTTTTGTTGTCTCTGATGCAAAAAGGGCTCTGGTTGGAGCAGGGGCTCGTGCGCTCTTCTATCCCACTCTGCTTTATAATGTCATTAGGAATAAGATTCAGCCCGACTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTCCCTGTTGATGTTCCCTGCTTAAAAGAGCTTGGTGTTCGAGGAGTCGTCACATTGAATGAGTCATATGAAACCTTGGTGCCAACCACGCTCTATCATGCACATGGAATTGATCATCTGGTAATTCCTACTAGAGACTACTGTTTTGCACCTTCATTGGGTGACTTGTGCTGTGCTGTAGACTTCATTCATGAAAATGCATCAACTGGACGGGTTACATATGTACACTGCAAGGCTGGGCGTGGTCGCAGCACAACTGTTGTTATCTGTTACCTGGTGCATCACAAGCTGATGACACCTGATGCTGCGTATGACTATGTGAAGTCGATTAGGCCGAGGGTACTTCTTGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTACTACCTTAGGGTTAGGAAAGCTGTTGCCTATGCACCTTCAGCCAACCTAATAGTGAAAGCAACTGAGGCAGCACTAGCTTCACGAGATCTTGTGACATTTGATGACGGTTCTGTAGTTGTGGTAACTGAGTCGGATCTTGAAGGTTATGACCCAAGTTTCCATTCAAGTAATGTGGGAAGTGAGATATGGGCAGATTTGAGTGTGGTTTACCGTGTGCGAGTTGCTGGACAAGCGGCGTTGGCAAGAATATCATGCCTTTGGCTGCAATATGGTACGCACCAGAAGGTTTCTACAGAGAAATTGAACAGCACCAATCACTTGAGAGGCATTAGTGTTGATATTCACGTCTACTGA 984 0.4593 MHIEELKGGEVEGGDEGKLYVGSGVVGGTSFVVSDAKRALVGAGARALFYPTLLYNVIRNKIQPDFRWWDKVDEFILLGAVPFPVDVPCLKELGVRGVVTLNESYETLVPTTLYHAHGIDHLVIPTRDYCFAPSLGDLCCAVDFIHENASTGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPDAAYDYVKSIRPRVLLASSQWQAVQEYYYLRVRKAVAYAPSANLIVKATEAALASRDLVTFDDGSVVVVTESDLEGYDPSFHSSNVGSEIWADLSVVYRVRVAGQAALARISCLWLQYGTHQKVSTEKLNSTNHLRGISVDIHVY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1172 327 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 302 - -
Bisa11g1172 327 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bisa11g1172 327 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Bisa11g1172 327 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bisa11g1172 327 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Bisa11g1172 327 FunFam Dual specificity phosphatase domain protein 68 215 - -
Bisa11g1172 327 Pfam Dual specificity phosphatase, catalytic domain 88 210 IPR000340 GO:0008138|GO:0016311
Bisa11g1172 327 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bisa11g1172 327 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 212 IPR029021 -
Bisa11g1172 327 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1172 Bisa-ChrBisa11 30007643 30010412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1172 10 327 Protein tyrosine phosphatase (PTP) family AT2G35680 60.245 4.94e-132 377