Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1161 ATGACTCGGCGGTGTTCTCATTGCAGCCACAATGGCCACAACTCCAGGACTTGCCCCAACCGCGGAGTCAAGCTCTTCGGAGTTCGATTGACGGATGGGTCGATCCGGAAGAGTGCGAGTATGAGCAGTCTCAGCCACTACGCTGCCTCCACCTCCGGAGCACATCAAGCTGGGTCTAACAACCCGGGTTCTCCCGGTGAGACCCCTGATCATGGTGCTGCCGCCGACGGTTACGCCTCCGAGGATTTTGTTCCTGGATCGTCGTCAGTTTCCAGGGAAAGGAAGAAGGGTGTTCCATGGACCGAGGAGGAACATAGGATGTTTTTACTTGGACTTCTGAAGCTTGGCAAAGGTGATTGGCGTGGAATTGCACGAAATTATGTTGTATCAAGGACACCTACTCAAGTGGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAATGTGTCTAGGAGGAAAAGACGTTCAAGCTTGTTTGACATAGTTGCAGATGAATCAGCTGAAACACCAATGGCAGCACAAGACTTCATACCAGCTAGTCAACCAGAGGCTGAAACAGAAGGCAACGACCCCTTGCCTGCTCCGCCATCTCTTGATGAAGAGTGCGAATCCATGGATTCTGCTTACTCCAACGATGGAGAGTCTGCCTCTTTAAAGCCAGATAGTTCACAATCACAGTACCCAGTGATTTATCCTGCATACTTCTCTCCTTTCTTCTCATTCCCTCTACCTTATTGGTCAGGATACAGTCCAGAGCCAACCAATAAGGAGACAGCACACGAAGTGCTGAAGCCCACCGCAGTACATTCTAAAAGCCCAATTAATGTTGATGAACTGGTTGGCATGTCAAAACTGAGTTTAGGGGAGTCAATTGGTGACTCTGGTCCTTCCTCTCTCTCGCTAAAGCTCCTCAAGGGACCCTCTCGCCAGTCAGCTTTTCATGCAACTCCAGCATGTGGTGATTCAAATATGAATGGCAGTGCGATCCATGCAGTTTAA 1002 0.496 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAASTSGAHQAGSNNPGSPGETPDHGAAADGYASEDFVPGSSSVSRERKKGVPWTEEEHRMFLLGLLKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADESAETPMAAQDFIPASQPEAETEGNDPLPAPPSLDEECESMDSAYSNDGESASLKPDSSQSQYPVIYPAYFSPFFSFPLPYWSGYSPEPTNKETAHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGDSGPSSLSLKLLKGPSRQSAFHATPACGDSNMNGSAIHAV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1161 333 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Bisa11g1161 333 MobiDBLite consensus disorder prediction 182 223 - -
Bisa11g1161 333 MobiDBLite consensus disorder prediction 46 100 - -
Bisa11g1161 333 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Bisa11g1161 333 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Bisa11g1161 333 Gene3D - 100 149 - -
Bisa11g1161 333 SMART sant 96 146 IPR001005 -
Bisa11g1161 333 MobiDBLite consensus disorder prediction 209 223 - -
Bisa11g1161 333 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g1161 333 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Bisa11g1161 333 CDD SANT 99 144 IPR001005 -
Bisa11g1161 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Bisa11g1161 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Bisa11g1161 333 PANTHER TRANSCRIPTION FACTOR KUA1 3 271 - -
Bisa11g1161 333 MobiDBLite consensus disorder prediction 46 66 - -
Bisa11g1161 333 FunFam transcription factor MYB1R1 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1161 Bisa-ChrBisa11 29873334 29875804 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa11g1161 Myb_DNA-binding 1.1e-09 CL0123