Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1159 ATGAAGAGAGACACTCACAGTCACAAACATCCAACTTACCGTGGAGTTCGCATGCGTCAATGGGGGAAATGGGTTTCTGAAATCAGAGAGCCGAAGAAGAAATCTAGAATCTGGCTCGGCACTTTTCCGACTCCTGAGATGGCGGCTCGAGCTCACGACGTCGCAGCTCTTACTATCAAAGGCGGCTCGGCTTTCCTCAACTTCCCCGAATTAGCCCCGCAGCTTCCGCGCCCAGCCACCACCTCCCCTAAGGACATCCAAGCCGCCGCCTCCAAGGCAGCCGCACTCAATTTCCAAACGAGCGTCGAAGCCGAAGCCGAAGTCGAATCCGTATCCTCCTCAGACTACGCCAAAGGATCGTCGAATTCACCGTCGAGTGACAAGGACGACACTTTCTTTGACCTCCCCGATCTCTTCCGAGACCTAAATTACAGTGTTGACGAGTTTCGTTTCTCGTCGTCGACGCCGTGGCTGGCGGCCGGAACTGATCGCTTAGACCCAGCTTTCCGGCCGGACGATCCTCTTCTTCTATGGGAGTCTTAA 543 0.5488 MKRDTHSHKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALTIKGGSAFLNFPELAPQLPRPATTSPKDIQAAASKAAALNFQTSVEAEAEVESVSSSDYAKGSSNSPSSDKDDTFFDLPDLFRDLNYSVDEFRFSSSTPWLAAGTDRLDPAFRPDDPLLLWES 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1159 180 ProSiteProfiles AP2/ERF domain profile. 12 69 IPR001471 GO:0003700|GO:0006355
Bisa11g1159 180 FunFam Ethylene-responsive transcription factor 2 11 70 - -
Bisa11g1159 180 MobiDBLite consensus disorder prediction 109 129 - -
Bisa11g1159 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 141 - -
Bisa11g1159 180 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Bisa11g1159 180 Gene3D AP2/ERF domain 12 70 IPR036955 GO:0003700|GO:0006355
Bisa11g1159 180 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Bisa11g1159 180 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Bisa11g1159 180 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Bisa11g1159 180 SMART rav1_2 12 75 IPR001471 GO:0003700|GO:0006355
Bisa11g1159 180 SUPERFAMILY DNA-binding domain 12 70 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1159 Bisa-ChrBisa11 29814884 29815426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1159 2 179 AP2-EREBP Transcription Factor Family AT2G44940 50.472 2.65e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g1159 AP2 1.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1159 11 29814884 29815426 Bisa01g1081 01 18077309 18077920 CCT