Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1157 ATGGCGCCTAAGAACGGTGGATCGACAAAGATATCGTTGGACAGAGGTGCATGGACCACAGAGGAGGATCGAAAACTGGCTCAATGCATTGAAACTCACGGGGCCAAGAGGTGGAAGACTATCGCAGTCAAATCAGGTCTAAAAAGATGCGGAAAGAGTTGCAGGTTGAGATGGTTCAATTATCTAAGACCCAATATCAAGAGAGGCAATATATCAGATGAAGAAGAAGATTTGATTCTTAGGCTTCACAAACTGCTGGGAAATAGGTGGTCTTTGATCGCTGGGAGGCTCCCTGGACGAACAGACAATGAGATTAAAAACTATTGGAATTCTCATTTGTGCAAAAAGTTAAATCACAAGGAGGAAGCGCCAGAAACTTCAAGGGCACGAGAAACTATGCCCCGGGATACCTTGGACAGCGCTCTAGTAGACCATGAGAATGCCAATGGAAGTGAAAATTCTGATGTTAACTTTGATGTGAATGAGTTCTTCGACTTCTCCATAAAAGGACCTGATGGGTTAGATTGGTTGAACAAGTGTTTAGAAATTGACCAGGTTCCTGAGATCCTAGAGAAGAGGTCACCATAG 588 0.4388 MAPKNGGSTKISLDRGAWTTEEDRKLAQCIETHGAKRWKTIAVKSGLKRCGKSCRLRWFNYLRPNIKRGNISDEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKLNHKEEAPETSRARETMPRDTLDSALVDHENANGSENSDVNFDVNEFFDFSIKGPDGLDWLNKCLEIDQVPEILEKRSP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1157 195 Gene3D - 72 139 - -
Bisa11g1157 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa11g1157 195 SMART sant 67 115 IPR001005 -
Bisa11g1157 195 SMART sant 14 64 IPR001005 -
Bisa11g1157 195 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa11g1157 195 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 9 140 - -
Bisa11g1157 195 FunFam MYB-related transcription factor 14 67 - -
Bisa11g1157 195 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bisa11g1157 195 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa11g1157 195 FunFam Transcription factor TT2 71 140 - -
Bisa11g1157 195 CDD SANT 72 113 IPR001005 -
Bisa11g1157 195 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa11g1157 195 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Bisa11g1157 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bisa11g1157 195 CDD SANT 17 62 IPR001005 -
Bisa11g1157 195 Gene3D - 15 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1157 Bisa-ChrBisa11 29747265 29748083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1157 15 160 MYB Transcription Factor Family AT5G40330 55.034 3.80e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g1157 Myb_DNA-binding 3.9e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1157 11 29747265 29748083 Bisa01g1082 01 18115108 18116496 CCT